Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0283 ATGGCCATTCAAGCACAGTGGTATCCAAATAATTCTGCTTCTCCGTTTTGCAACAATGGTTTTTGTGCTGGTGGGCTTATTGACTCTCATATCAATTTCCAACCGAAAAATCATCTTCAACAACAGCAGTTGCAGCTATCAGAACAGCATTTGAAAGAGTTATATAATGCGAGTCATGGAACTGTTGATCCAAATCTTCATGTTTATAATTCAAAAGCCGTGAATTCTCATATGTTTGCTGTTCAGCTTGAGAAGCAAAGGGAGGAGATTGATCAGTACATGAAATCCGAGGATGAGAAATTGAGATATATGCTACGGGAGCATGGGAAACAAGTGATGGCATTGTTGAAGAAACTGGAATCTCGATCACTTCATGTTTTAAGGGAAAAAGATGAAGAAATTGCGCAAGCTATTAAGAAAAGGGTGGAGTTGGAAGAGTATTTAAGAAAGCTAGAGGCAGAAAATATGAAGTGGCAGAAAGTGGCTCAAGAGAAGGAAAACATGGCATTGTCCCTCTATAAAACATTGGAGGAAATGACAGAAAGTGGCAATTTTTTGAACAATGGGATGGTGGCAAATGATGCAGTGTCCTTTTGTGGCGAAACTGGGGGAAAAGAAGAGATGGACGAAGAAGAAGCAACAGCAGAGAAAGAGAAAAAACGTATAGAATGTTGCGGTGGGGTGAGTGAGTTTGAACAGAATACGAGAAGAGGAGTAATGGTTTGTAAAAGCTGTCATTCTAGGAGCTCGAGCTTTCTGTTTCTACCATGCAGGCACCTTTCTTGCTGCAAAGTTTGCAACACTTTCCTCGAGGCATGCCCCGTTTGCAGCACACCAAAGAAGGCTACCATTGAGTTGAGACTTTGA 867 0.4118 MAIQAQWYPNNSASPFCNNGFCAGGLIDSHINFQPKNHLQQQQLQLSEQHLKELYNASHGTVDPNLHVYNSKAVNSHMFAVQLEKQREEIDQYMKSEDEKLRYMLREHGKQVMALLKKLESRSLHVLREKDEEIAQAIKKRVELEEYLRKLEAENMKWQKVAQEKENMALSLYKTLEEMTESGNFLNNGMVANDAVSFCGETGGKEEMDEEEATAEKEKKRIECCGGVSEFEQNTRRGVMVCKSCHSRSSSFLFLPCRHLSCCKVCNTFLEACPVCSTPKKATIELRL* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0283 288 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 228 286 IPR013083 -
Gso12g0283 288 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 1 287 IPR017066 -
Gso12g0283 288 PANTHER BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 2-RELATED 1 287 - -
Gso12g0283 288 Pfam Zinc finger, C3HC4 type (RING finger) 241 281 - -
Gso12g0283 288 SUPERFAMILY RING/U-box 237 281 - -
Gso12g0283 288 Coils Coil 127 168 - -
Gso12g0283 288 PIRSF SBP1_RNase_bind 24 288 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0283 Gso-Chr12 2533568 2535767 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0283 K19042 - gmx:100813629 549.28