Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0267 ATGGGTTCTAGCGAGGATCCGAACAACAAAGTCGATTTTCCGTACGAGTCCCCGGCATCGCAACCCTTTCTATCGAAACCCTCGTACCCTTCATCGTCTTCTTCGGCTGTGGAAGAAGAATCGGAGTCAAACCAGCAATTCCATCACATCACTTACAATTCAGGTCCTCGCTCCTTCAAGGACCTTCCTTTCCTCATCCTCTTCCTTCTCTTCGTACTTTCCTCCTTCGCCTTTGGCATCTTCGCCATCATCCACCGAAACAACAGCTACCCCTCTCTCTCCTCCTTCACCTACGACCCCACCACCACCTCCTGCGTCCTAAACCCTTCTAATTCCTCCTCCTCCTCCGTCTCCACGCTCTCCCTCGTCGACACAACATCATCCGTTTCATCGAAATTGGTGAAGGGTCTCATATGGACTCTCGTCATCACCTTCGTTCTCAGCGTCCCCTTGTGCTGGGCTCTGCTTCTCTTACTCAAGCATTACACCAAACAGATTGTCTACGCTGCTATTCCACTCTTTATCGCCATCCCCGTTTTCCTCAACGTGTATTGGTTCGTGGCCTGCACCCTCGGCGCGTCTTGCAGCAACGCTTTCCCCCTCGCGTACCGGGTTCTGATTTTGGTGTTCTTGTTTTTGGTGATTGGGATCATTGTGTGGATCTTGGTGGTGAATTGGCATCGCGTGGAGCTCACGGTGAGCATAATCGGGGTCGCTTCCCACGCACTTTCGAGGAACATGGCTTTGTTCGGGGTGCTGCCTTGTTTGTCTGTTGGGCTGGTGCTGTATTTTGTTCCAATCGTGGTTTTCATGGTGTTTGCGAGGTTTAATGGGAAGATTGTTGTGAAGAATTTGAAGAGTGGATATGACTGTGAATGGAAGGAGGATTCTTGGGTGCCAGCTTATTATGCTTTGGCTGTTCTCACCATGTTGTGGTCTGCGGCAGCTATGGTTGAAGCTCAAGTTTATGTCATCAGTGGGACTATTGCTAATTGGTATTTCTCCAAGGAACATCAAACTCCTAAGCGGAGTATTCGAACTCCTCTCAGAAATGTTTTTGGTCCTTCTTCTGGCACGATATGTTTGTCAGGATTGCTTGTCTGTGTTGTTCGAATGGTGCGTTCTGCGGTTGATAGTGCAAGACAAGAGGATACTCCTGGGATAGTGAACCTTGTGTTGCGGTGCTGTGTAAATGCATTGCTGACAGCAGTTGATTTTCTTAACAAGTTTACCATAAACTTTGCTGCAATAACTGGTGAAGCCTACTGCTCTTCTGCAAGGATGACATATGAACTTCTAAGACGCAATCTTCTCTCTGCTGTTTTTGTGGAGACCATCTCATCTCGCATCCTGGCTGGAATTGTCTTTGTTTTTTCTGCATCATATACAATAGTGGTCTGTGTTATCTTAAAAGCTGGTACCAATCTTGGGTCTGACTCATATTTTGTGGCTGCGATGGCATGGGTGCTACTGATGGTAGTGCTGGGTTACCTCGTGCATGTGCTAGACAACGTAATTGACACAATTTACGTCTGCTATGCGATAGACCGGGATAGAGGAGAGGTTTGTAAACAAGACGTCCATGAGGTTTACATTCAACTACCCATTAGTAGAAGTCTCAGACAGTCTGTTACTACAAGAACTCTAGGTGTGTAA 1656 0.474 MGSSEDPNNKVDFPYESPASQPFLSKPSYPSSSSSAVEEESESNQQFHHITYNSGPRSFKDLPFLILFLLFVLSSFAFGIFAIIHRNNSYPSLSSFTYDPTTTSCVLNPSNSSSSSVSTLSLVDTTSSVSSKLVKGLIWTLVITFVLSVPLCWALLLLLKHYTKQIVYAAIPLFIAIPVFLNVYWFVACTLGASCSNAFPLAYRVLILVFLFLVIGIIVWILVVNWHRVELTVSIIGVASHALSRNMALFGVLPCLSVGLVLYFVPIVVFMVFARFNGKIVVKNLKSGYDCEWKEDSWVPAYYALAVLTMLWSAAAMVEAQVYVISGTIANWYFSKEHQTPKRSIRTPLRNVFGPSSGTICLSGLLVCVVRMVRSAVDSARQEDTPGIVNLVLRCCVNALLTAVDFLNKFTINFAAITGEAYCSSARMTYELLRRNLLSAVFVETISSRILAGIVFVFSASYTIVVCVILKAGTNLGSDSYFVAAMAWVLLMVVLGYLVHVLDNVIDTIYVCYAIDRDRGEVCKQDVHEVYIQLPISRSLRQSVTTRTLGV* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0267 551 MobiDBLite consensus disorder prediction 1 40 - -
Gso12g0267 551 Pfam Plasma-membrane choline transporter 209 518 IPR007603 GO:0022857|GO:0055085
Gso12g0267 551 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 46 532 IPR007603 GO:0022857|GO:0055085
Gso12g0267 551 PANTHER CTL-LIKE PROTEIN DDB_G0288717 46 532 - -
Gso12g0267 551 MobiDBLite consensus disorder prediction 21 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0267 Gso-Chr12 2382631 2386869 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0267 - - gmx:100810591 956.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0267 12 2382631 2386869 Gso11g0907 11 8153210 8157589 GST