Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0264 ATGGGTCTCTTAGCATCCTCATGCTTCATTCTCATTGCTCTCCTACTCCTCACTCCCAAAGGTGTTATGGGTGCCACCTTCACATTCTTTAACAAATGCGACTACACAGTGTGGCCTGGGATTCTCGCAAATGCCGGTAGCCCACCACTCGACAGCACCGGTTTTGAGCTCCCCAAGGACACTTCTCGCGCCTTCCAAGCTCCCACCGGCTGGTCCGGTCGTTTCTGGGGCCGAACCGGTTGCACCTTCGACGGATCCGGCGCCGGCTCATGCCTCACCGGCGACTGCGGCTCCGGCCAAGTCGAATGCAACGGCGCCGGAGCCGCCCCGCCGGCAACCCTGGCGGAGTTCACGCTCGGCACCGGAGGTCAAGACTTCTACGACGTGAGCCTCGTTGATGGCTACAATCTTCCCATGATCGTGGAAGGCACTGGTGGGTCGGGTCTTTGCGCCTCCACGGGTTGTACCTCGGATCTGAACCAGCAATGTCCTGCGGAGCTGAGAGCCTCGGAGGGAAGCGCGTGCAAGAGCGCGTGTGAGGCTTTTGGTAGCCCTGAGTACTGCTGCAGCGGCGCGTATGGCTCACCCGCCACTTGCAGGCCGTCCATTTACTCGGAGATGTTCAAGGCTGCTTGCCCTAGGTCTTATAGCTACGCATACGATGATGCTACGAGTACGTTTACGTGTTCCGGCGCCGATTATACCGTTACCTTCTGTCCATCCTCTCCAAGTCAGAAATCTTCACGAGATACCACTACCAACCCCATGACCTCAACAACAACATCACCAGGGTCAGGGACAGTGACAGGAACCGGAACCGGAACAGGATCCGAAGGGGCAGTGGTATACACGGGTGCGGACAACGGCGTTGCGTATAATACAGTTACGGATTCCGGGTCAAGTTCAGGATCCGGAGGAGAAACAATGCTCGCAGATGGGTCATATTTAGCTGGTTTAGCCATGGGAGACTCCCCTAAAAGAACAGTTTCCATCGCGTTTGTTTACTCTGCTAGCTTTTTGCTTATTCTCTTCCTGCTTTAG 1041 0.562 MGLLASSCFILIALLLLTPKGVMGATFTFFNKCDYTVWPGILANAGSPPLDSTGFELPKDTSRAFQAPTGWSGRFWGRTGCTFDGSGAGSCLTGDCGSGQVECNGAGAAPPATLAEFTLGTGGQDFYDVSLVDGYNLPMIVEGTGGSGLCASTGCTSDLNQQCPAELRASEGSACKSACEAFGSPEYCCSGAYGSPATCRPSIYSEMFKAACPRSYSYAYDDATSTFTCSGADYTVTFCPSSPSQKSSRDTTTNPMTSTTTSPGSGTVTGTGTGTGSEGAVVYTGADNGVAYNTVTDSGSSSGSGGETMLADGSYLAGLAMGDSPKRTVSIAFVYSASFLLILFLL* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0264 346 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Gso12g0264 346 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Gso12g0264 346 PRINTS Pathogenesis-related protein signature 87 116 IPR001938 -
Gso12g0264 346 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Gso12g0264 346 PRINTS Pathogenesis-related protein signature 230 239 IPR001938 -
Gso12g0264 346 PANTHER OS03G0233200 PROTEIN 7 265 IPR001938 -
Gso12g0264 346 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Gso12g0264 346 Gene3D Thaumatin 25 240 IPR037176 -
Gso12g0264 346 SUPERFAMILY Osmotin, thaumatin-like protein 25 241 IPR037176 -
Gso12g0264 346 ProSiteProfiles Thaumatin family profile. 24 240 IPR001938 -
Gso12g0264 346 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 7 265 - -
Gso12g0264 346 Pfam Thaumatin family 31 240 IPR001938 -
Gso12g0264 346 MobiDBLite consensus disorder prediction 240 273 - -
Gso12g0264 346 CDD TLP-PA 26 239 - -
Gso12g0264 346 SMART tha2 27 240 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0264 Gso-Chr12 2351280 2353940 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0264 2 271 Receptor kinase-like Gene Family AT5G38280 46.429 2.13e-81 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0264 - - gmx:100801173 655.981