Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0217 ATGGCCTCAACTACACTAACAACCCTCTCCCTCCGCAACCTCTCTTATCCTACACCCTCCTCCTCTTCTTACCCTACGCACCTCTCCGCCAACCCCTCCTCCCTCCAATTCCCCAACTTCTCCCACCGCGCCACCACCACGCGCCGCGCCCGCGTCGTCGTCGTCTCCGCCGTCGAGGCACCGGAGAAAATCACCAAGCTCGGCGACGAAATCGCGGGACTCACGCTCGAGGAGGCCAAGAACCTCGTCGACTTCCTCCAGGACAAGCTCGGCGTCTCCGCGGCAGCGTTCGCCCCCGTGGCCGTCGCCGCGGGTGCCGTCGGCGCCGTGGCGGACGCTCCGGCGGCGGTGGAGGAGAAGACGGAGTTCGACGTGTTGATCGAGGAGGTGCCGAGCAACGCGAGAATCGCGGTGATTAAGGCGGTGAGGGCGCTGACTAACCTGGCGCTGAAAGAGGCGAAGGAGTTGATAGAAGGGTTGCCGAAGAAGTTCAAGGAAGGGATTTCGAAGGACGAAGCTGAAGATGCGAAGAAGCAACTTGAAGAAGCCGGTGCCAAGGTTACCATTGCTTAG 573 0.6195 MASTTLTTLSLRNLSYPTPSSSSYPTHLSANPSSLQFPNFSHRATTTRRARVVVVSAVEAPEKITKLGDEIAGLTLEEAKNLVDFLQDKLGVSAAAFAPVAVAAGAVGAVADAPAAVEEKTEFDVLIEEVPSNARIAVIKAVRALTNLALKEAKELIEGLPKKFKEGISKDEAEDAKKQLEEAGAKVTIA* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0217 190 CDD Ribosomal_L7_L12 62 189 IPR000206 GO:0003735|GO:0005840|GO:0006412
Gso12g0217 190 PANTHER 50S RIBOSOMAL PROTEIN L12-1, CHLOROPLASTIC-RELATED 1 189 - -
Gso12g0217 190 PANTHER 39S RIBOSOMAL PROTEIN L12 1 189 IPR000206 GO:0003735|GO:0005840|GO:0006412
Gso12g0217 190 TIGRFAM L12: ribosomal protein bL12 65 189 IPR000206 GO:0003735|GO:0005840|GO:0006412
Gso12g0217 190 Hamap 50S ribosomal protein L7/L12 [rplL]. 57 190 IPR000206 GO:0003735|GO:0005840|GO:0006412
Gso12g0217 190 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 63 125 IPR036235 GO:0003735|GO:0005840|GO:0006412
Gso12g0217 190 SUPERFAMILY ClpS-like 118 189 IPR014719 -
Gso12g0217 190 Gene3D Single helix bin 63 118 IPR036235 GO:0003735|GO:0005840|GO:0006412
Gso12g0217 190 Pfam Ribosomal protein L7/L12 C-terminal domain 123 189 IPR013823 GO:0003735|GO:0006412
Gso12g0217 190 Pfam Ribosomal protein L7/L12 dimerisation domain 63 111 IPR008932 GO:0003735|GO:0005840|GO:0006412
Gso12g0217 190 Gene3D - 119 189 IPR014719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0217 Gso-Chr12 1837628 1838575 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0217 K02935 - gmx:100800454 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0217 12 1837628 1838575 Gso11g0844 11 7569162 7569972 GST