Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0215 ATGACGCGACCTTACGGTGTGAAGGGGGGCCGGAAGCGAAAGCACGCCGAACCCAAATACGACGAAGAAGACCAAGAAACGCAACCAAAAAAAGCTGTGGTGGAGGTGGAGCACAACAAAGAAGAAGAACAACAGCAACAAACACCAGAGGGGGATGAATTGAGCGGTATCCCAATTACGCCCAGTGAGAACAACACCAACAAACCCAACGTCATCTTCATTCTAGAAAAAGCTTCTTTGGAAGTCGCCAAAGTCGGCAAGACATATCAGCTCTTAAACTCCGACGACCATGCCAATTTCCTCCGCAAAAATAACAAGAATCCCGGAGATTACAGGCCTGACATTACTCATCAGTCCCTTTTATCTATTTTGGATAGCCCACTAAATAAAGCTGGGAGATTGCGGTCGGTATACATAAGGACTGAAAAAGGTGTTCTTATAGAGGTTAAGCCCTTTGTTCGTATTCCAAGAACATTCAAACGCTTTGCTGGTGTCATGTTGGAATTGCTTCAAAAATTGAGCATATCTGCTGTTGGCAAGCGCGAGAAACTTCTCCGAACCATCAAAAACCCTGTCACGCAGTATTTGCCTATCAACTCACGAAAAATAGGTCTATCGTATAGTTCAGAAAAGCTTGTAGATATGGATGACTATGTATCAACTGTTCCCAGCAATATGGACCTTGTCTTTGTGGTAGGAGCAATGGCCCATGGGAAGATTGAGACAGATTATACAGAAGATTATGTAGCAATTTCGGGGTACCCTCTAAGTGCTGCTTATTGTATTACAAGGATTACTGGTGCCCTTGAGAGAAAGTGGAAGATTTTGTGA 831 0.4392 MTRPYGVKGGRKRKHAEPKYDEEDQETQPKKAVVEVEHNKEEEQQQQTPEGDELSGIPITPSENNTNKPNVIFILEKASLEVAKVGKTYQLLNSDDHANFLRKNNKNPGDYRPDITHQSLLSILDSPLNKAGRLRSVYIRTEKGVLIEVKPFVRIPRTFKRFAGVMLELLQKLSISAVGKREKLLRTIKNPVTQYLPINSRKIGLSYSSEKLVDMDDYVSTVPSNMDLVFVVGAMAHGKIETDYTEDYVAISGYPLSAAYCITRITGALERKWKIL* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0215 276 SUPERFAMILY alpha/beta knot 59 275 IPR029028 -
Gso12g0215 276 CDD Nep1-like 71 270 IPR005304 GO:0070037|GO:0070475
Gso12g0215 276 PANTHER NEP1/MRA1 25 275 IPR005304 GO:0070037|GO:0070475
Gso12g0215 276 MobiDBLite consensus disorder prediction 14 47 - -
Gso12g0215 276 MobiDBLite consensus disorder prediction 49 66 - -
Gso12g0215 276 MobiDBLite consensus disorder prediction 1 66 - -
Gso12g0215 276 Pfam EMG1/NEP1 methyltransferase 73 270 IPR005304 GO:0070037|GO:0070475
Gso12g0215 276 Gene3D - 71 276 IPR029026 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0215 Gso-Chr12 1824037 1826678 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0215 K14568 - gmx:100788480 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0215 12 1824037 1826678 Gso11g0841 11 7552364 7555062 GST