Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0203 ATGGGGAGCGTTTCGTCCGAAGATGGTTCCGACCGTTGTGGGAGTTATAGCCTCAGTGCTGATGTCAGCGAGTCCGAGAGCTGCAGCAGCTTCTCCGCACGCCGCTTCGACGCCGAGGGAGCTTCCAGCTCCGCCAACCTCTCGCCGCGGCCCGTCGCTGCTCACTTTAACTTCCCGCCGGCACAGGTAATGCTTCCCGTCATTGGCGGCAAAGACGTCGTCGTTTGGGATCACAAGCGTGACCTCGATCTGTCGGAGCAACTGCATTTTGCAGAAGTGGAAATGATGAAGGAGAGGTTTGCTAAGCTGCTTCTGGGAGAGGACATGTCTGGAGGCGGAAAAGGGGTGTGTACTGCACTTGCAATCTCCAATGCAATAACTAATCTCTCTGCAACCGTTTTTGGCGAACTGTGGAGGTTGGAGCCGCTGGCGCCACAGAAGAAAACCATGTGGCGTAGAGAAATGGAGTGGCTGTTATGTGTGAGTGATTCCATTGTGGAGTTAGTGCCATCTGTGCAGCAGTTTCCTGGGGGTGGAACCTATGAGGTGATGGCCACGCGGCCTCGCTCGGATTTGTATATCAATCTTCCGGCTCTGAAGAAGCTTGATGGGATGCTGCTTAATATGCTTGATGGGTTTCATGACACACAGTTTTGGTATGTTGACCGGGGAATTATATTGGGTGATTCCAAGGATTGTGATGCCTATGGTAGACCTTCGGTTAGGCAAGAGGAGAAATGGTGGCTTCCCTCTCCCAAGCTTCCCCCAAATGGCTTGTCCGAGGAAAGTAGGAAAAGGTTGCAGCAGTGTAGGGATTGCACCAATCAGATTCTAAAAGCTGCTGTTGCAATTAATACTTCTGTTCTTGCTGAAATGGAAATTCCCGGTGCCTACATTGAGTCCTTGCCCAAGAATGGAAAGGCTTGTCTAGGGGATATAATCTATCGATACATAACGGCAGACCAGTTCTCGCCTGAATGTCTCCTTGATTGCCTGGATCTTTCAACAGAGCACCACACTCTGGATATAGCTAATAGAATTGAGGCTGCTATACATGTATGGAGGCTGAAGGACCATAAGAAACATCTAAGTTCAGCAAAATCCAGACGGTCTTGGGGTGGAAAGGTGAAGGGACTTGTTGCTGACGGTGAGAAGAACAAGAACAACTTTCTTGCCCAACGGGCTGAGACACTTCTAGAAAGCTTGAAACACAGATTTCCAGGGCTCCCTCAGACTGCACTAGATATGGCCAAAATTCAATATAATAAGGATGTTGGACAGTCTATTCTTGAAAGTTATTCAAGAGTGATGGAGAGCTTGGCCTTTAACATAATGGCCAGGATAGATGATGTCCTATATGTAGATGATAGCATAAAGCGGTGTGCAGCTGCAGATTCTCTCTCGTTGTTCAGCAGGGGAGGTTTTGGTGGCATGCCCATTCAGAAGCGATTCTCTCCTAGTCCCTTCTCAATTCAACACACCCCATATGCCTCCCCATTTGCAACGCCAACATTTTGTTCCTCCACTCCTGTTACTGGGAGCCCTTGCAGTCCTGCAAGGATACATGATGTGAAAAGGAATGCTCCAAAGGAGGGTGCAGATTCGAAGACTGAAAAGTTGGCCACATCTGAGTTTGAGAGGGTTTGGTCATATGCCGGAAACCTCAGTGCAAGAAGAGCATCTGGCGATGCTCCAGAAAGAGACTGA 1707 0.4915 MGSVSSEDGSDRCGSYSLSADVSESESCSSFSARRFDAEGASSSANLSPRPVAAHFNFPPAQVMLPVIGGKDVVVWDHKRDLDLSEQLHFAEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKTMWRREMEWLLCVSDSIVELVPSVQQFPGGGTYEVMATRPRSDLYINLPALKKLDGMLLNMLDGFHDTQFWYVDRGIILGDSKDCDAYGRPSVRQEEKWWLPSPKLPPNGLSEESRKRLQQCRDCTNQILKAAVAINTSVLAEMEIPGAYIESLPKNGKACLGDIIYRYITADQFSPECLLDCLDLSTEHHTLDIANRIEAAIHVWRLKDHKKHLSSAKSRRSWGGKVKGLVADGEKNKNNFLAQRAETLLESLKHRFPGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFNIMARIDDVLYVDDSIKRCAAADSLSLFSRGGFGGMPIQKRFSPSPFSIQHTPYASPFATPTFCSSTPVTGSPCSPARIHDVKRNAPKEGADSKTEKLATSEFERVWSYAGNLSARRASGDAPERD* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0203 568 MobiDBLite consensus disorder prediction 1 24 - -
Gso12g0203 568 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 568 IPR038937 GO:0005085
Gso12g0203 568 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 92 459 IPR005512 GO:0005085
Gso12g0203 568 Gene3D PRONE domain, subdomain 1 85 325 - -
Gso12g0203 568 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 1 568 - -
Gso12g0203 568 Gene3D PRONE domain, subdomain 1 326 465 - -
Gso12g0203 568 ProSiteProfiles PRONE domain profile. 83 465 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0203 Gso-Chr12 1722320 1725847 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0203 - - gmx:100789706 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0203 12 1722320 1725847 Gso11g0830 11 7464121 7468323 GST