Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0202 ATGAAGCTGATTAATAAACCATCGCAACTACGTGCCCTCTTCTGCTCCATTTTGCTTCTTTTGGAATTCGCTTTCGTTGCTGCGGAGGACCCTTATAGATTCTTCGACTGGACCATTACCTACGGTGACATTTATCCCCTCGGAGTTAAACAACAGGGTATTCTTATCAATGGCCAATTCCCAGGCCCTGAAATCTATTCCGTTACCAATGACAATTTGATCATTAACGTGCACAATAACTTGACCGAGCCGTTTCTCCTATCATGGAATGGTGTTCAACAAAGGAGAAATTCTTACCAAGATGGAGTTTATGGAACCACATGTCCCATCCCTCCTGGGAAGAACTTTACCTACACACTCCAAGTCAAAGATCAAATTGGAAGTTTCTTCTATTTTCCATCTCTTGCTTTCCACAAGGCAGCTGGTGGTTTTGGTGCCATCAAAATCCTTAGCAGACCAAGGATCCCTGTCCCATTCCCTGACCCAGCTGGTGATTTCTCCCTTCTTATTGGAGATTGGTACCAAATCAATCACAAGAAGCTCCAGAGTGTTCTAGATTTTGGACACAAACTTCCATTCCCTCAAGCCGTTCTCATCAATGGTCGTCCAAGTGGCACAACATTTACAGCTATACAAGGGAAAACATACAGGCTTAGAATATCAAATGTTGGGCTTCAAAACACACTCAACTTTAGGATTCAAGGCCACGACATGAAGTTGGTGGAAGTTGAGGGAACTCACACCATTCAAACCACGTATTCCTCGTTAGATGTTCATGTGGGACAATCTTATTCCGTTCTTATCACAGCTGATCAAGCACCCAAGGACTACTACATTGTAGTTTCCACTCGTTTCACTAATAAGATCCTAACAAGCACTGCCATCCTTCACTACAGTAACTCCCTACAATCTGTTTCTGGACCAATTCTCGGTGGCCCAACCACTCAAATCGATTGGTCCATCAAACAAGCTCGTTCTATCAGGACAAACTTGACAGCAAGTGGACCAAGGCCAAATCCACAAGGCTCCTACCACTATGGTTTAATAAACATTAGTAGGACAATTACACTGGTGAGCTCAGCAGCACAAGTGAATGGGAAGCAAAGATACGCAGTGAACAGTGTATCATTCAGACCAGCTGACACTCCTTTGAAGCTGGCAGATTACTTCAACATTGGAAGGGTTTTCCAAGTTGGAAGCATACCAGATAGTCCTTCTGGTAGACCTATGTATCTTGACACCTCAGTCATGGGTGCTGATTTTCGAGCCTTTGTCGAGATCGTGTTTCAGAACCATGAAAACATCATCCAAAGCTGGCACATTGATGGATACTCATTTTGGGTTGTAGGAATGGATGGTGGTGTGTGGACACCTAATAGTCGTAACCAATACAACCTTAGAGATGCAGTATCGAGGAGCACCACACAGGTATATCCCAAGTCATGGACCGCAATTTACATGGCATTAGATAATGTGGGTATGTGGAACGTGAGGAGTGAATTTTGGGCACGACAATACCTTGGACAACAATTCTATTTGAGAGTGTATTCACCAGTTGGGTCCATTAGGGATGAATATCCAATTCCTAAGAATGCTATTCTCTGTGGCAAAGTTGCAGGCAGAACAACTAGATGA 1635 0.4361 MKLINKPSQLRALFCSILLLLEFAFVAAEDPYRFFDWTITYGDIYPLGVKQQGILINGQFPGPEIYSVTNDNLIINVHNNLTEPFLLSWNGVQQRRNSYQDGVYGTTCPIPPGKNFTYTLQVKDQIGSFFYFPSLAFHKAAGGFGAIKILSRPRIPVPFPDPAGDFSLLIGDWYQINHKKLQSVLDFGHKLPFPQAVLINGRPSGTTFTAIQGKTYRLRISNVGLQNTLNFRIQGHDMKLVEVEGTHTIQTTYSSLDVHVGQSYSVLITADQAPKDYYIVVSTRFTNKILTSTAILHYSNSLQSVSGPILGGPTTQIDWSIKQARSIRTNLTASGPRPNPQGSYHYGLINISRTITLVSSAAQVNGKQRYAVNSVSFRPADTPLKLADYFNIGRVFQVGSIPDSPSGRPMYLDTSVMGADFRAFVEIVFQNHENIIQSWHIDGYSFWVVGMDGGVWTPNSRNQYNLRDAVSRSTTQVYPKSWTAIYMALDNVGMWNVRSEFWARQYLGQQFYLRVYSPVGSIRDEYPIPKNAILCGKVAGRTTR* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0202 544 SUPERFAMILY Cupredoxins 159 338 IPR008972 -
Gso12g0202 544 Gene3D - 347 542 IPR008972 -
Gso12g0202 544 Gene3D - 163 337 IPR008972 -
Gso12g0202 544 Pfam Multicopper oxidase 39 152 IPR011707 GO:0005507
Gso12g0202 544 Pfam Multicopper oxidase 383 517 IPR011706 GO:0005507|GO:0016491
Gso12g0202 544 PANTHER MULTI-COPPER OXIDASE TYPE I FAMILY PROTEIN-RELATED 12 539 - -
Gso12g0202 544 Pfam Multicopper oxidase 166 300 IPR001117 -
Gso12g0202 544 CDD CuRO_3_AAO_like_1 379 500 IPR034275 GO:0005507
Gso12g0202 544 SUPERFAMILY Cupredoxins 348 537 IPR008972 -
Gso12g0202 544 Gene3D - 32 153 IPR008972 -
Gso12g0202 544 PANTHER MULTI-COPPER OXIDASE 12 539 IPR045087 -
Gso12g0202 544 CDD CuRO_1_AAO_like_1 34 149 IPR034273 GO:0005507
Gso12g0202 544 SUPERFAMILY Cupredoxins 27 179 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0202 Gso-Chr12 1714780 1719331 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0202 - - gmx:100793934 1105.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0202 12 1714780 1719331 Gso11g0829 11 7456557 7461413 GST