Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0200 ATGGAAGAAGTGGCTGAAGAAGCTCAATATTTCAGATCAGAAATAGCTCTGTTGAATTTCTCGGATGCCACCTTCAAACCCCCACTTTCTCCTCTGTTGATACACATTGATCCTCTCCTACCCAATGGTCACACTTGTTCTGCATCAGAATCTGATCCATCACCCACTTCACAGCATCAGCAGGAGCAGCATCATCCAAAAGATGCGTGGCTTCCAATCACTGAATCCAGAAATGGAAATGCCTATTATGCAGCCTTCCATATTCTTAATTCCAACATTGGATTCCAGGCTCTCATGCTTCCCGTTGCCTTCGCTACTCTTGGTTGGGCATGGGGTACAGTATGTTTGTCACTAGCATTTGTTTGGCAGCTCTATGCTATATTTCTTCTTGTTCAGCTTCACGAATACGTCCCTGGAATTCGTCACAGCAGATACCTCTTCCTTGCTATGGCTGCCTTCGGAAAAAAGTTAGGGAAGGTGGGAGCATTATTCCCCGTAATGTACCTTTCAGGAGGCACATGCGTCATGCTAATCATCACCGGAGGTGGGACCATGAAACAATTATTCAAGACGCTTTGCGAAAACGATAATGGGAAAACATGTAATGCCCATGCACTTAGCGGGGCTGAGTGGTTCTTGGTGTTTACCTGTGTCGCCATTCTTATTGCACAGTTGCCCAACCTCAACTCAATGGCCATGGTTTCTCTCGTCGGCGCGGTTACCTCTATCACTTATTGCACCCTCTTTTGGGTTCTCTCTGTTAAGAAGGGTAAGCCTAACAACGTATCCTATAGCTCATCCCTGTCCCAAGAACACACACCAGTTGCTAAGATCAGTGACGTTCTCAATGCCATTGGAATCATTGTCCTAGCCTTCAGAGGGCATAATGTTTTGCTCGAAATACAGGGGACGCTGCCTTCAAATTTGGAACAAACATCCAAAATACCAATGCGAAGAGGAGTGAGCATGTCATATGTACTCATTTCCATGTGCGTGTTTCCCCTCGCAATTGCCGGATTCTGGGCCTATGGAAACCAGATTAACGATGGAGGATTGTTATATTCGTTTCCAGAATTCCACAAGAGGCAAATCACAAAATTCTCTATGGGTGCCATATATGTTCTAGTAATAATACATTGTTTAACCAGCTTTCAAATATATGCGATGCCTGTTTTTGACAACCTGGAGATAAGATACACGAGCATAAAGAATCAGAGATGTTCACCATTAGTGAGAACATGCATAAGATTATTCTTCGGGGGGCTGACATTTTTTATCTCAGTCACGTTCCCTTTCCTTCCAAGACTATCAACACTACTTGGAAGCATGACCCTTGTGCCTATCACATATGCATACCCCTGTTTCATGTGGTTATCCCTCAAGAAACCTCGTCCAAGAGGTATAATTTGCTGCTTCAACGTTGCACTCGGTTCTGTAGGGATGCTTCTCAGTGCTCTTTTGGTAGCTGCAGCTATTCGGACTCTAGCTCTCAATGGCCTTGATGCTAACTTCTTCAGACCATAA 1524 0.4449 MEEVAEEAQYFRSEIALLNFSDATFKPPLSPLLIHIDPLLPNGHTCSASESDPSPTSQHQQEQHHPKDAWLPITESRNGNAYYAAFHILNSNIGFQALMLPVAFATLGWAWGTVCLSLAFVWQLYAIFLLVQLHEYVPGIRHSRYLFLAMAAFGKKLGKVGALFPVMYLSGGTCVMLIITGGGTMKQLFKTLCENDNGKTCNAHALSGAEWFLVFTCVAILIAQLPNLNSMAMVSLVGAVTSITYCTLFWVLSVKKGKPNNVSYSSSLSQEHTPVAKISDVLNAIGIIVLAFRGHNVLLEIQGTLPSNLEQTSKIPMRRGVSMSYVLISMCVFPLAIAGFWAYGNQINDGGLLYSFPEFHKRQITKFSMGAIYVLVIIHCLTSFQIYAMPVFDNLEIRYTSIKNQRCSPLVRTCIRLFFGGLTFFISVTFPFLPRLSTLLGSMTLVPITYAYPCFMWLSLKKPRPRGIICCFNVALGSVGMLLSALLVAAAIRTLALNGLDANFFRP* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0200 507 PANTHER OS05G0424000 PROTEIN-RELATED 64 502 - -
Gso12g0200 507 PANTHER LYSINE HISTIDINE TRANSPORTER-LIKE 7 64 502 - -
Gso12g0200 507 MobiDBLite consensus disorder prediction 45 60 - -
Gso12g0200 507 Pfam Transmembrane amino acid transporter protein 78 491 IPR013057 -
Gso12g0200 507 MobiDBLite consensus disorder prediction 45 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0200 Gso-Chr12 1698180 1702513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0200 65 507 Organic Solute Cotransporters AT1G47670 50.564 3.84e-153 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0200 - - gmx:100793408 1025.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0200 12 1698180 1702513 Gso11g0826 11 7432981 7437291 GST