Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0196 ATGGAAGAAGAGAAAAAAGTCATATCAGAAGTTTCAGTGACAAAGGTTGTTGAGGAGGCGGATCATAAGAATGAAAGCATTAAGGAGACAAATGGAGACCTGCCAAGTGAAGTAAAGAAAGAAGAGGAAGAGAATGCCTTTGATGGAGAATTCATTAAGGTTGAGAAAGAAGAGAATTCCATTGATGATAAGTCCCACAAAACTGAAAGAAGCTCAGATTCTCCTAGCAGAGAATTTCTAGAAGCCCAAGAGAAGATACAGGAACTCGAGGTTGAACTCCAAAGACTAACAGAATCTTTGAAGACCTCTGAGCATGAAAATGATCAGCTGAAGGGAGAGATCTCAGTTACAAAGGAGAAATTGGAGGAAAGTGGAAAGAAATATGAAGAGCTGGATCTGAGTCACAAGAAATTGCAAGAGCAGATTCTTGAGGCTGAGAATAAATATAATCAGCAGCTCAGCACTCTTGAAGAGGCGCTGCAAAGTCAAGAAGTGAAGCAGAAGGAGCTTTTTCAAGTGAAGGAAGCATTTGATGGTATGAACCTTGAGCTTGAAAACTCCAGAAAGAGGATGCAGGAATTGCAGGATGAGCTACAACTTTCAGCAGATGAGGCACAGAAATTCGAGGAGCTGCATAAGCAAAGTGGTTCACATGCTGAATCTGAGGGAAAAAAGGCCTTGGAATTTGAGAGACTACTCGAAGAAGCCAAACTGACTGCAAAAGGAGTGGAAGATGAGATGGCTTCCCTTAAGGAAGAATTGAAAGGAGTTTATGATAAGATTGCTGAAAATCAAAAGGTTGAAGAAGCACTTAAAACAACCACAGCTGAACTCTCTACCATCCAAGAGGAGTTGACACTCTCAAAATCCCAGCTATTGGAAGTTGAGGAAAGACTGTCTTCAAGGGACTCTTTAGTGGACGAGTTGACCAATGAATTAAACCTGATAAAGACTTCAGAAACACAGGTAAAGGAAGACATGTTAGCACTTCAAAATCTGTTGGCCTCTACAAAGGAAGAACTGGAAGAAAAAATTTCGGAGTTGGAAACTGCAAGGTCCAAGTTGCAGGAGGAGGAAAAATTGAGGGAATCAATTGAAGCTGCACTCAAGAGTCAGGAAGCACAGTTTCTCACTGTACAAGAGGAACTGACTAAATTTAAAACAGAAAAAGAAACTCTTGAAGCAACCATGGAAGATCTAACTCGTAGTTCGAAGAAGTTTGAGGAGCTGTGCGCTGATTTAGAGGAAAAGCTAAAGCTCTCAGGCGAAAATTTTCTTAGAACAGATTCTCTTTTATCCCAGGCACTTTCAAACAATGCAGAGCTTGAGCAGAAGGTGAAGTCTTTGGAAGATCTCCATAATGAATCTGGAGCTGCTGCAGCTACTGCTACTCAAAGGAGTCTTGAACTTGAGGGACATATTCAGACATCAACTGCAGCTGCAGAAGAGGCAAAATCACAATTGAGGGAGCTGGAAACACGCTTCATAGCAGCAGAGCAGAGGAACGTGGAGCTTGAGCAACAATTAAACTTAGTACAATTGAAAACCAGTGATGCTGAGAGAGAAGTGGCTGAATTATCTGAGCAAATATCTAATCTCAACGCTAAATTAGAAGAGGCCAAGGAAGAGAAGAGTCTTCTTAATAGCCAGCTACAGGAGTACACAGAAAAAGTAGCTCTACTTGAATCCGACTTAAATCAGTCATCTTTGCGGAGTTCACAATTAGAAGAGGAGTTGAAGAATGTCAACGAAAAATGTGCCGAGCACGAAGACCGAGCCAGTATGAACCATGAGCGTAGCCGAGAACTGGAAGATTTAATCCAGAGCTCTCACTCCAAATTGGAAGATTCTGATAAAAAGGTGAGTGAGTTGGAGTTGTTACTTGAAGCAGAGAAATACAGAATTCAGGAACTAGAACAACAAATAAGCACACTAGAAGAGAAGCGTGGTGCTTCAGAAGGGCAAGCCAATAAATACCTTGATGATGTATCTAATCTGACATCAGAACTTGAGGCAATTCAAGCACGAGCCTCAACCCTCGAAACTACTCTGCAAGCGGCTAATGAAAGAGGAAAGGAATTAGAAGATTCTTTGAATGCAGTGACAGAAGAAAAGAAAAATTTAGAAGATGCTTCTATCAGTTTGAATGAGAAGCTTGCTGAGAAAGAAAACCTATTGGAAATTTTGAGGGATGATTTAAATCTTACACAAGATAAATTGCAAAGCACTGAAAGTGATCTCAGGGAAGCTGAATTGAGAGAGAGTGAAATAATTGAGAAACTTAAAGCTTCAGAAGAAAACCTTGTCGTTAGAGGAAGAGATATAGAGGAGACAGCTGCAAGACACTCAGAACTTCAATTGTTGCACGAGTCTCTGACGAGAGATTCAGAACAGAAATTCCAAGAAGCTATAGAAAAATTCAACAACAAGGACTCTGAGGTTCAGTCCCTGCTTGAGAAAATTAAGATTTTGGAGGAACAGATAGCAAAGGCTGGGGAACAATCTACATCTTTGAAGAATGAATTTGAAGAGAGTTTGAGCAAACTGGCTTCTTTGGAAAGTGAAAATGAAGATTTGAAACGGAAAATTTTAGAAGCCGAGAGCAAAAGTTCCCAGTCTTTTAGTGAAAATGAATTACTGGTTGGAACAAACATTCAACTGAAAACCAAGATTGATGAACTTGAGGAATCATTGAACCATGCTCTATCCGAGAAGGAAGCCGCTGCTCAAGAACTTGTGTCTCATAAGAACAGTATAACTGAACTGAATGATTTACAATCAAAATCCTCTGAAATTCAATGTGCAAATGAAGCTCTCATTCTAAAAGTAGAATCACAATTACAAGAAGCATTGCAGAGGCATACTGAGAAGGAATCCGAAACCAAAGAATTGAATGAGAAGCTGAATACACTAGAAGACCAAATAAAGCTTTTCGAAGAACAGGCACGTGAAGCAGTTGCAACTTCTGGAACTCATAAAGCTGAACTGGAGCAGAGTCTCATAAAATTAAAGCATCTTGAAATTGTCATTGAGGAACTTCAAAACAAGTCACTCCACCATGAAAAAGAAACTGCAGGGCTAAATGAAGAAAATTCAAAGCTTAATCAGGAAATAGCTAGCTATGAATACAAATTAAGTGATTTACAGGAGAAGCTCTCTGCAGCACTTGTTGAGAAGGAGGAAACAGATAAAGAGCTACTCACCTTGAAGGATGCCATGGAAAAATTAGGGACAAAGCATAGTGCAGAAGTACAGACATTAAATTCACAGATATCTTCACTGGTGGATGAGAAGAACTTGCTCAATGATACTAATCAGGATTTAAAGAAGGAACTTCAGTCTCTGATATTTGACCTTGAAGAGAAGTTGAAGGAACAACAGAAAATTGAAGGCTCCCTGAGATCCCAGGTCGAAACTCTCAAAATTGAGATTGCTGAGAAATCTGCATTGCGAAGTCAGCTGCAGGAAATTGAAGGGAAACTGACAAAAGCTGAATCTAGACTAAACGAAGAGGTTGGAAGTGTTCAAGCTGCTGCTTCTCAAAGAGAGGCAGAATTAAGTTCAAAGTTGGAAGACTATGCACAAAAATTCAATGATAGAAATGTGTTGAATGATAAGGTTGCAGCACTTGAGAAAGAGTTGCAACTTGCACGGGATGGTAATGTGAACCAGGAAGGAGCAGAGTCTCAGAAGTTGGAACTTGAGGCAGCCTTGAAAAATTCTCTTGCAGAACTTGAAACTAAGAAAAATGATATCTCTCTTTTACAGAAACAAGTGACAGATCTAGAGCAGAAATTGCGAGTTGCTGGTGATAAATCCTCAGTTAAGGGTGATGAGAGTGTTGATCAGAAAGAAGGGTTGGAAGTAAAATCCAGGGACATTGGTTCAAGCCTCTCGATTCCATCAAAAAGAAAGAGCAAGAAAAAGTCAGAAGTAACAAGTGGTCAGACATCATCTTCATCCGAGACTCATGTTCAAACTGGCCATGATTCTCCTGTCATAAATTTCAAGTTCATCTTGGGAGTAGCTCTTGTGTCCATTGTCTTTGGCATAATTCTTGGAAAGCGTTACTAG 4074 0.3999 MEEEKKVISEVSVTKVVEEADHKNESIKETNGDLPSEVKKEEEENAFDGEFIKVEKEENSIDDKSHKTERSSDSPSREFLEAQEKIQELEVELQRLTESLKTSEHENDQLKGEISVTKEKLEESGKKYEELDLSHKKLQEQILEAENKYNQQLSTLEEALQSQEVKQKELFQVKEAFDGMNLELENSRKRMQELQDELQLSADEAQKFEELHKQSGSHAESEGKKALEFERLLEEAKLTAKGVEDEMASLKEELKGVYDKIAENQKVEEALKTTTAELSTIQEELTLSKSQLLEVEERLSSRDSLVDELTNELNLIKTSETQVKEDMLALQNLLASTKEELEEKISELETARSKLQEEEKLRESIEAALKSQEAQFLTVQEELTKFKTEKETLEATMEDLTRSSKKFEELCADLEEKLKLSGENFLRTDSLLSQALSNNAELEQKVKSLEDLHNESGAAAATATQRSLELEGHIQTSTAAAEEAKSQLRELETRFIAAEQRNVELEQQLNLVQLKTSDAEREVAELSEQISNLNAKLEEAKEEKSLLNSQLQEYTEKVALLESDLNQSSLRSSQLEEELKNVNEKCAEHEDRASMNHERSRELEDLIQSSHSKLEDSDKKVSELELLLEAEKYRIQELEQQISTLEEKRGASEGQANKYLDDVSNLTSELEAIQARASTLETTLQAANERGKELEDSLNAVTEEKKNLEDASISLNEKLAEKENLLEILRDDLNLTQDKLQSTESDLREAELRESEIIEKLKASEENLVVRGRDIEETAARHSELQLLHESLTRDSEQKFQEAIEKFNNKDSEVQSLLEKIKILEEQIAKAGEQSTSLKNEFEESLSKLASLESENEDLKRKILEAESKSSQSFSENELLVGTNIQLKTKIDELEESLNHALSEKEAAAQELVSHKNSITELNDLQSKSSEIQCANEALILKVESQLQEALQRHTEKESETKELNEKLNTLEDQIKLFEEQAREAVATSGTHKAELEQSLIKLKHLEIVIEELQNKSLHHEKETAGLNEENSKLNQEIASYEYKLSDLQEKLSAALVEKEETDKELLTLKDAMEKLGTKHSAEVQTLNSQISSLVDEKNLLNDTNQDLKKELQSLIFDLEEKLKEQQKIEGSLRSQVETLKIEIAEKSALRSQLQEIEGKLTKAESRLNEEVGSVQAAASQREAELSSKLEDYAQKFNDRNVLNDKVAALEKELQLARDGNVNQEGAESQKLELEAALKNSLAELETKKNDISLLQKQVTDLEQKLRVAGDKSSVKGDESVDQKEGLEVKSRDIGSSLSIPSKRKSKKKSEVTSGQTSSSSETHVQTGHDSPVINFKFILGVALVSIVFGIILGKRY* 1358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0196 1357 SUPERFAMILY Tropomyosin 433 621 - -
Gso12g0196 1357 Coils Coil 940 988 - -
Gso12g0196 1357 Coils Coil 621 767 - -
Gso12g0196 1357 MobiDBLite consensus disorder prediction 1297 1328 - -
Gso12g0196 1357 MobiDBLite consensus disorder prediction 19 80 - -
Gso12g0196 1357 Coils Coil 383 417 - -
Gso12g0196 1357 Coils Coil 226 260 - -
Gso12g0196 1357 Coils Coil 432 459 - -
Gso12g0196 1357 Coils Coil 1140 1167 - -
Gso12g0196 1357 Coils Coil 79 166 - -
Gso12g0196 1357 Coils Coil 884 911 - -
Gso12g0196 1357 Coils Coil 474 592 - -
Gso12g0196 1357 SUPERFAMILY Tropomyosin 222 419 - -
Gso12g0196 1357 Coils Coil 327 375 - -
Gso12g0196 1357 MobiDBLite consensus disorder prediction 1312 1328 - -
Gso12g0196 1357 Coils Coil 177 211 - -
Gso12g0196 1357 Coils Coil 1193 1220 - -
Gso12g0196 1357 Coils Coil 1091 1129 - -
Gso12g0196 1357 Coils Coil 264 284 - -
Gso12g0196 1357 Coils Coil 807 869 - -
Gso12g0196 1357 Gene3D - 427 567 - -
Gso12g0196 1357 Coils Coil 1224 1272 - -
Gso12g0196 1357 PANTHER EARLY ENDOSOME ANTIGEN 1 1357 - -
Gso12g0196 1357 Coils Coil 996 1065 - -
Gso12g0196 1357 SUPERFAMILY Tropomyosin 612 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0196 Gso-Chr12 1645212 1655439 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0196 - K20283 gmx:100792883 2405.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0196 12 1645212 1655439 Gso11g0820 11 7373690 7384579 GST