Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0194 ATGCACACTCTCCTCCGATCCACTCTCAGGACCAAGACTGCTTCATCTTTAGCATATGCTGCGGTTTCCAGAAGTGCTCAAGAAAATCTCCTTCAGGCTCCCTTATTGTCTAGATCAAATAGCACGGAGGCTTCCTTGGCAAAGGATACTTCCTCTAATGATGTGAAAAATGGTCAAGGGTTCAAAGGCCATAGTATGCTTGCTCCTTTCACGGCTGGGTGGCAGACTACTGATTTGCATCCTCTGGTCATAGAAAAGTCAGAGGGAAGCTATGTATATGACATTAATGGGAAGAAATATCTTGATGCACTGGCTGGTCTGTGGGCCACTTCTTTAGGGGGAAGTGAGCCACGCCTTGTTGATGCTGCCATTGCACAATTAAAGAAGTTGCCATTTTACCATTCCTTTTGGAATCGAACCACATTACCTTCTTTGGATCTAGCCAAGGAACTCCTAGAAATGTTCACAGCCAGAAAAATGGGGAAAGCTTTTTTTGTTAACAGTGGATCAGAAGCCAATGACACTCAGGTGAAACTTGTATGGTATTATAACAATGCACTTGGAAGACCAGATAAGAAGAAATTCATAGCTCGTGCTAAATCGTATCATGGTTCAACACTGATAGCAGCCAGTCTTTCTGGCCTTCCGGCTCTGCATCAAAAATTTGATTTGCCAGCTCCTTTTGTATTGCACACTGACTGTCCACATTACTGGCGGTATCATCTTCCAGGTGAGACAGAGGAAGAATTTTCAACCAGATTAGCCAAAAATTTGGAGCAGCTGATTCTGAAAGAGGGACCAGAGACAATTGCTGCATTTATTGCTGAACCTGTAATGGGGGCAGGAGGTGTAATAGTTCCACCATCAACTTATTTTGAGAAGGTCCAAGCCGTTGTCAAGAAGTATGACATTCTTTTTATTGCAGATGAGGTAATCTGTGCCTTTGGAAGGCTTGGGACAATGTTTGGATGTGACAAATACAACATTAAGCCAGACCTTGTATCCCTTGCTAAGGCACTATCTTCTGCATATTTGCCAATTGGAGCTGTCCTTGTAAGCCCAGAAATTTCAGACGTTATACACGCACAAAGCAACAAACTTGGTTCATTTTCTCATGGTTTTACTTATTCTGGACACCCTGCAGCCTGTGCTGTGGCAATTGAAGCACTCAAGATCTATAAGGAAAGAAATATTGTTGACCAAGTTAACAAGATTGCCCCAAGGTTCCAAGATGGCATAAAAGCTTTTTCTGACAGTCCCATCATTGGAGAGATACGGGGAACTGGCTTGATTCTGGGCACTGAGTTCACAGACAACAAGTCACCTAATGATCCGTTTCCTCCTGAATGGGGAGTAGGTGCCTATTTTGGAGCACAATGTGAGAAGCATGGGATGTTGGTTCGTGTAGCAGGGGATAACATCATGATGTCTCCTCCATATATTATATCTCAAGGAGAAGTTGATGAGTTAATCAGCATTTATGGGAAAGCTTTGAAAGAAACGGAAAAGAAGGTACAGGAACTCAAGTCTCAGCGCAAGTAG 1542 0.4319 MHTLLRSTLRTKTASSLAYAAVSRSAQENLLQAPLLSRSNSTEASLAKDTSSNDVKNGQGFKGHSMLAPFTAGWQTTDLHPLVIEKSEGSYVYDINGKKYLDALAGLWATSLGGSEPRLVDAAIAQLKKLPFYHSFWNRTTLPSLDLAKELLEMFTARKMGKAFFVNSGSEANDTQVKLVWYYNNALGRPDKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYHLPGETEEEFSTRLAKNLEQLILKEGPETIAAFIAEPVMGAGGVIVPPSTYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYLPIGAVLVSPEISDVIHAQSNKLGSFSHGFTYSGHPAACAVAIEALKIYKERNIVDQVNKIAPRFQDGIKAFSDSPIIGEIRGTGLILGTEFTDNKSPNDPFPPEWGVGAYFGAQCEKHGMLVRVAGDNIMMSPPYIISQGEVDELISIYGKALKETEKKVQELKSQRK* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0194 513 PANTHER GAMMA AMINOBUTYRATE TRANSAMINASE 1, MITOCHONDRIAL 19 508 - -
Gso12g0194 513 CDD OAT_like 76 498 IPR005814 GO:0008483|GO:0030170
Gso12g0194 513 Gene3D - 116 398 IPR015421 GO:0003824
Gso12g0194 513 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 19 508 - -
Gso12g0194 513 Coils Coil 491 513 - -
Gso12g0194 513 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 306 343 IPR005814 GO:0008483|GO:0030170
Gso12g0194 513 Pfam Aminotransferase class-III 81 497 IPR005814 GO:0008483|GO:0030170
Gso12g0194 513 SUPERFAMILY PLP-dependent transferases 66 500 IPR015424 -
Gso12g0194 513 Gene3D Aspartate Aminotransferase, domain 1 82 498 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0194 Gso-Chr12 1626179 1636017 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0194 K16871 - gmx:100792355 1026.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0194 12 1626179 1636017 Gso11g0818 11 7352341 7361237 GST