Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0188 ATGGGCAGAGTGATGGTGGGAGTGGCGGTGGGGCTGGCGGCGGTGGCGTGTGCGGTGGCGGCGGTGGCGGTGGGGCAGAGGATGAGGAGCAGAGGGAATTGGAAGAGAGTGGCGAGGGTGTTGAAGGAGGTTGAGGAAGGGTGCGAGACATCGGTTGGGAGGCTGAGGCAGGTGGTGGATGCTATGGCCGTTGAGATGCACGCTGGGTTGGCATCAGAAGGTGGTTCCAAGCTCAAAATGCTTCTCACATATGTTCATAATCTCCCTAATGGGACTGAGAAAGGAACATATTATGCACTAGATCTTGGGGGTACTAATTTTCGGGTTTTGCGGGTTCATTTGCATGGTCAACAATCTTCTGTTTTGGAACATGAAGTAGAGCGACAGCCCATTCCTCAAAATCTAATGACCAGCACAAGTGAGGATCTCTTTGATTTCATTGCTTCTTCATTAAAGGAATTCATTGAGAAAGAAGGAGACGGTTCCGAGCTTTCACCGGACAGAAGAAGGGAACTTGGATTCACATTTTCTTTCCCTGTGAAACAAATGTCTGTTTCCTCTGGCATTTTATTAAAATGGACAAAAGGGTTTTCCATTGTAGATTTGGTAGGAATAGATGTTCCTGCATGTTTGCAGGAAGCATTGACAAGAAAAGGACTAGACGTGCGGGTGGCTGCATTGGTCAATGATACTGTTGGAACATTAGCTCTTGGACATTATCATGACTCAGATACTGTTGCTTCTGTAATAATTGGCACTGGTACCAATGCTTGCTATTTGGAACGGGTTGATGCTATTATCAAGTGTCAAGGTCTTCCTACAACATCAGGATACATGGTTGTAAATATGGAATGGGGAAACTTTTGGTCATCTCATTTACCAAGAACATCTTATGATATTGATTTAGACTCTGAAAGCCCTAATCCAAATGATCAGGGTTTTGAGAAAATGATATCAGGAATGTATCTTGGTGACATCGTGAGGAGAGTCATTCTAAGGATGTCGCTAGAGTCAGATATGCTTGGACCTATTTCTTCCAAACTTTCAATGCCCTTTATGCTGAGGACTCCTATGATGGCTGCCATGCACGAGGATGATTCTCCCGACTTGAGAGAAGTAGCAAGAATCCTTAAAGGCATCCTTGAGATTCCCGATGTTCCTTTAAAGTTAAGAAAAGTTGTGGTGAAGGTGTGTGATGTGGTGACTCGCAGAGCGGCACGATTGGCAGCTGCCGGCATTGTTGGTATCTTGAAGAAGATTGGTAGGGATGGGAGTGGTGGCATCGCAGGTGGGCGAAGAAGTGATATGAAAATGAAAAGAACAGTTGTAGCAATTGAAGGAGGTTTGTATTCTAGCTATACATTGTTTAGGGACTACTTGCATGAAGCTTTGAACGATATATTGGGGGAAGATATTGCCAGGCATGTAATTCTTAAGGTCACTGAAGATGGATCAGGCGTTGGAGCTGCACTGCTTGCTGCCTCGCATTCATCATATGATGTAGATACAGTATAG 1515 0.4508 MGRVMVGVAVGLAAVACAVAAVAVGQRMRSRGNWKRVARVLKEVEEGCETSVGRLRQVVDAMAVEMHAGLASEGGSKLKMLLTYVHNLPNGTEKGTYYALDLGGTNFRVLRVHLHGQQSSVLEHEVERQPIPQNLMTSTSEDLFDFIASSLKEFIEKEGDGSELSPDRRRELGFTFSFPVKQMSVSSGILLKWTKGFSIVDLVGIDVPACLQEALTRKGLDVRVAALVNDTVGTLALGHYHDSDTVASVIIGTGTNACYLERVDAIIKCQGLPTTSGYMVVNMEWGNFWSSHLPRTSYDIDLDSESPNPNDQGFEKMISGMYLGDIVRRVILRMSLESDMLGPISSKLSMPFMLRTPMMAAMHEDDSPDLREVARILKGILEIPDVPLKLRKVVVKVCDVVTRRAARLAAAGIVGILKKIGRDGSGGIAGGRRSDMKMKRTVVAIEGGLYSSYTLFRDYLHEALNDILGEDIARHVILKVTEDGSGVGAALLAASHSSYDVDTV* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0188 504 SUPERFAMILY Actin-like ATPase domain 26 242 IPR043129 -
Gso12g0188 504 SUPERFAMILY Actin-like ATPase domain 244 497 IPR043129 -
Gso12g0188 504 Pfam Hexokinase 248 494 IPR022673 GO:0005524|GO:0005975|GO:0016773
Gso12g0188 504 PRINTS Hexokinase family signature 98 114 - -
Gso12g0188 504 PRINTS Hexokinase family signature 172 197 - -
Gso12g0188 504 PRINTS Hexokinase family signature 224 240 - -
Gso12g0188 504 PRINTS Hexokinase family signature 247 261 - -
Gso12g0188 504 PRINTS Hexokinase family signature 312 334 - -
Gso12g0188 504 PRINTS Hexokinase family signature 394 416 - -
Gso12g0188 504 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Gso12g0188 504 Pfam Hexokinase 41 240 IPR022672 GO:0005524|GO:0005975|GO:0016773
Gso12g0188 504 PANTHER HEXOKINASE 1 500 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Gso12g0188 504 Gene3D - 83 493 - -
Gso12g0188 504 ProSitePatterns Hexokinase domain signature. 172 197 IPR019807 GO:0004396|GO:0005524|GO:0006096
Gso12g0188 504 Gene3D - 61 482 - -
Gso12g0188 504 CDD NBD_sugar-kinase_HSP70_actin 99 261 - -
Gso12g0188 504 ProSiteProfiles Hexokinase domain profile. 35 494 IPR001312 GO:0001678|GO:0004396|GO:0005524|GO:0005536|GO:0005975
Gso12g0188 504 PANTHER HEXOKINASE-3 1 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0188 Gso-Chr12 1571367 1575533 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0188 K00844 - gmx:100790064 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0188 12 1571367 1575533 Gso11g0812 11 7285676 7289752 GST