Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0173 ATGGCTCCAAGCAAGCTCAATTCCTCGGGAAATACTAGTATGCCATGTTCACAGGCTGAGAATGGTTTTGTCAATTCCTTTTCTCTCTTCCCCGAGAAAGTGGTGCAAGAGCTTCTTCAATCTCCAGTCCAGGGGTCGGATGACCATCTTATTGAGTTCTCTGAAGCTTTAAGAACTGTTGCGAAGGCTCTCAGGCTAGTTGCCGAAGGGAAAGCTTCTGCTCAAGCTGAGGCTGCTGAATGGAAACGTAAATATGAGTTGGAGAGGGATCGGAATCTGAAGTTTGAACATGCAGAGAAATCATGTATAGAGCATCAGGCTGAACATGAGGATGTGAGGACAAATAACCCTGCCAAACAACCTGTTTTATGTAATGAAGCTAATGGACAGTCTGAGAAATGTTGTTCAAGGAATGGTATTTGCTCCCATGAAGTTCTTAGGGATGGAACACCTGGTTCTGATTCCAAGATGGTCAAAAAGGCTTCATTTAAACTCTCATGGTTCAGCAAAGGTGATCAAAGTGATCAGTACAAACACGACATTGTCTCTTTTGAAAGGGGAAATATAACCACTGCAGAGCGCAGTAGTAAGCAGATCTCTTTGAAGTGGGAGTCATGCCCACAGACAGTGCTCATATTGACCAAACCAAATTCAGTTTCAGTTCAAATTCTGTGTGCTGAAATGATTAGATGGTTGAGCCAGCAAAAGAATCTACACATCTATGTGGAACCACACGTCAGGGTTGAACTTTTAACAGAATCATCACACTTTAACTTTGTAGAAACTTGGAATGATGATAAGGAACTTTTGAGACTACACACTAAAGTTGACCTCGTGGTAACTCTTGGTGGAGATGGCACTGTCCTATGGGCAGCTTCAATGTTCAAAGGGCCAGTGCCTCCTATTGTCCCCTTTTCTTTAGGGTCTCTTGGCTTTATGACCCCTTTCTATAGCGAACAATACAAAGAATGCCTAGAATCAATCTTAAAGGGCCCCATTAGCATCACATTACGGCATCGTTTGCAATGTCATGTTATACGAGATGCAGCTAAAAATGAATATGAAACTGAAGAACCTATCCTTGTTCTAAATGAGGTTACAATTGACCGTGGAATATCTTCTTTCCTCACAAATTTAGAATGTTACTGTGACAACTCCTTTGTCACGTGTGTGCAAGGGGATGGATTAATCTTATCTACTACATCTGGCAGTACAGCATATTCTTTAGCAGCTGGAGGATCAATGGTCCATCCGCAGGTTCCAGGTATTTTATTCACTCCAATTTGCCCACATTCGCTATCTTTTAGGCCATTGATATTTCCAGAGCATGTGACTTTGAGGGTGCAAGTGCCATTCAACAGCAGAAGCCCTGCATGGGCATCATTTGATGGCAAGGACAGGAAGCAGTTAGCACCTGGAGATGCACTTGTGTGCAGCATGGCTCCATGGCCTGTTCCTACGGCTTGTTTGGATGATTCTACTAATGACTTCTTGCGCAGTATTCATGAGGGCCTCCATTGGAATTTGAGAAAGACACAATCATTTGATGGCCCCCGGGAAACATGA 1566 0.4323 MAPSKLNSSGNTSMPCSQAENGFVNSFSLFPEKVVQELLQSPVQGSDDHLIEFSEALRTVAKALRLVAEGKASAQAEAAEWKRKYELERDRNLKFEHAEKSCIEHQAEHEDVRTNNPAKQPVLCNEANGQSEKCCSRNGICSHEVLRDGTPGSDSKMVKKASFKLSWFSKGDQSDQYKHDIVSFERGNITTAERSSKQISLKWESCPQTVLILTKPNSVSVQILCAEMIRWLSQQKNLHIYVEPHVRVELLTESSHFNFVETWNDDKELLRLHTKVDLVVTLGGDGTVLWAASMFKGPVPPIVPFSLGSLGFMTPFYSEQYKECLESILKGPISITLRHRLQCHVIRDAAKNEYETEEPILVLNEVTIDRGISSFLTNLECYCDNSFVTCVQGDGLILSTTSGSTAYSLAAGGSMVHPQVPGILFTPICPHSLSFRPLIFPEHVTLRVQVPFNSRSPAWASFDGKDRKQLAPGDALVCSMAPWPVPTACLDDSTNDFLRSIHEGLHWNLRKTQSFDGPRET* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0173 521 Coils Coil 71 91 - -
Gso12g0173 521 Gene3D - 197 508 IPR017438 -
Gso12g0173 521 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 209 513 IPR016064 -
Gso12g0173 521 Pfam ATP-NAD kinase N-terminal domain 210 331 IPR002504 GO:0003951|GO:0006741
Gso12g0173 521 Gene3D - 340 483 IPR017437 GO:0003951|GO:0019674
Gso12g0173 521 PANTHER NAD KINASE 1-RELATED 1 521 - -
Gso12g0173 521 Hamap NAD kinase [nadK]. 208 507 IPR002504 GO:0003951|GO:0006741
Gso12g0173 521 Pfam ATP-NAD kinase C-terminal domain 363 480 - -
Gso12g0173 521 PANTHER NAD KINASE 1 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0173 Gso-Chr12 1419297 1427033 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0173 K00858 - gmx:100813625 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0173 12 1419297 1427033 Gso11g0795 11 7132221 7139959 GST