Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0171 ATGAGCAGCAACTCAGGAAAAGTGGTGTGTGTGACTGGTGCTTCTGGTTTCATTGCTTCATGGATCATCAAACTGCTTCTCCAACGTGGTTACACTGTCAGGGCCACTGTTCGCGACCCATCTAAACCCGAAAAGGTTGATCACTTGCTCAAACTTGATGGTGCAAAGGAGAGGCTACATCTCTTTAAGGCAGATCTGCTGGAAGAAGGTTCCTTTGACTCTGCTTTTGAGGGTTGTGATGGTGTCTTTCATACTGCTTCACCCGTTCATTTCATTGTTACTGATCCACAGAATCAGTTAATTGATCCAGCGATTAAAGGAACCCTTAACGTTGTTAAATCATGTGCCAAATCGCCATCTGTGAAACAAGTTATTTTAACTTCTTCTGTTGCTGCCGTTTTATATAATGGAAGGCCTCGTACCCCCGAGGTTGTAGTTGACGAGACTTGGTTTTCGGATCCAGACTTCTTAAGGGAAAATGAGAGGTGGTATGCATTTGCAAAGACTTCGGCAGAGGATGCTGCCAGGAAATTTTTAAGCGAATACGACATTAAGTTGGTTGTTATTAACCCATCAATGTCCATAGGGCCTCTCTTGCAACCAGAGCTGAATGCAAGTTCTTCTTCAATTTTAAACCTAATCAATGGTTCACCAACGTTTTCAAATAATAGTTTTGGGTGGATCAATGTGAAAGATGTTGCAAACGCGCATATTCAAGCATATGAGATTGATTCAGCTAGTGGAAGATATTGTCTGGTTGAAAGAGTGATACACTTCTCCGAACTTGCAAAAATTTTACGTGATATGTACCCAACTTTACAGATTCCAGACAAGTGTGAAGACGATGAGCCTTTTATGCCAACATTTCAGGTTTCCAAAGAAAAGGCAAAGAGCTTGGGAGTTGAATTTATTCCCTTGGAAGTGAGCCTCAGGGAGACAGTTGAAAGTTTAAAAGAAAAGAAGTTTGTGGACTTCTAG 978 0.4162 MSSNSGKVVCVTGASGFIASWIIKLLLQRGYTVRATVRDPSKPEKVDHLLKLDGAKERLHLFKADLLEEGSFDSAFEGCDGVFHTASPVHFIVTDPQNQLIDPAIKGTLNVVKSCAKSPSVKQVILTSSVAAVLYNGRPRTPEVVVDETWFSDPDFLRENERWYAFAKTSAEDAARKFLSEYDIKLVVINPSMSIGPLLQPELNASSSSILNLINGSPTFSNNSFGWINVKDVANAHIQAYEIDSASGRYCLVERVIHFSELAKILRDMYPTLQIPDKCEDDEPFMPTFQVSKEKAKSLGVEFIPLEVSLRETVESLKEKKFVDF* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0171 325 Pfam NAD dependent epimerase/dehydratase family 9 242 IPR001509 -
Gso12g0171 325 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 2 323 - -
Gso12g0171 325 CDD FR_SDR_e 9 301 - -
Gso12g0171 325 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2 323 - -
Gso12g0171 325 Gene3D - 7 325 - -
Gso12g0171 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 318 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0171 Gso-Chr12 1400586 1405388 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0171 2 325 Miscellaneous Gene Families AT5G19440 66.049 1.48e-168 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0171 - - gmx:100804704 637.876