Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0169 ATGAGCAACAACAACGCAGGAAAGGTGGTGTGTGTGACGGGTGCTTCTGGTTTCATAGCTTCATGGATCGTCAAATTCCTTCTCCAACGTGGTTACACTGTCAGGGCCACCGTTCGCTACCCAAGTAATCTGAAAAAGGTAGATCACTTGGTTAAACTTGAGGGCGCAAAAGAGAGGTTGCAGCTGTTTAAGGCAGATCTGTTGGAAGAAGGTTCCTTTGACTCTGTTGTGGAAGGCTGTCATGGTGTTTTTCATACTGCTTCACCTGTCCGTTTTGTTGTCAACGACCCACAGGCTGAATTGCTTGATCCTGCAGTGAAGGGAACTCTTAATGTTCTCAAATCATGTGCAAAATCACCATCTGTCAAACGGGTTGTTTTAACTTCTTCTATTTCTGCAGTTGCATTTAATCGAAGACCTAAAACTCCTCAAGTGGTAGTTGATGAGACATGGTTTTCAGATCCAGATGTCTGTAGGGAATTAGAGTTGTGGTACACACTTTCAAAGACTTTGGCTGAGGATGCTGCCTGGAAATTTGTAAATGAAAACAGCATTGACATGATTTCTATTAACCCAACTATGGTGGCAGGACCTCTCTTACAACCAGAGATTAATGAAAGTGTTGAGCCAATTTTAAACCTAATAAATGGTAAACCATTTCCAAATAAATCTTTTGGATGGGTCGATGTGAAAGATGTTGCTAATGCTCATATTCTGGCCTATGAAATTGCTTCAGCTAGTGGAAGATATTGTTTGGTTGAGAGAGTCATACACTACTCTGAACTTGCTACGATTTTACGTGGTCTGTACCCCACATTACAAATTCCAGATAAGTGTGAGGTAGATGAGCCGTATATCCCAACATACCAGATTTCCACAGAAAAGGCAAAAAAGGACTTGGGAATAGAGTTTACTCCTTTGGAAGTGAGTCTCAGGGAGACTGTGGAAAGCTTTAGAGAAAAGAAGATTGTCAACTTTAATCCGTGA 987 0.4154 MSNNNAGKVVCVTGASGFIASWIVKFLLQRGYTVRATVRYPSNLKKVDHLVKLEGAKERLQLFKADLLEEGSFDSVVEGCHGVFHTASPVRFVVNDPQAELLDPAVKGTLNVLKSCAKSPSVKRVVLTSSISAVAFNRRPKTPQVVVDETWFSDPDVCRELELWYTLSKTLAEDAAWKFVNENSIDMISINPTMVAGPLLQPEINESVEPILNLINGKPFPNKSFGWVDVKDVANAHILAYEIASASGRYCLVERVIHYSELATILRGLYPTLQIPDKCEVDEPYIPTYQISTEKAKKDLGIEFTPLEVSLRETVESFREKKIVNFNP* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0169 328 Pfam NAD dependent epimerase/dehydratase family 10 242 IPR001509 -
Gso12g0169 328 Gene3D - 8 326 - -
Gso12g0169 328 CDD FR_SDR_e 10 301 - -
Gso12g0169 328 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 3 325 - -
Gso12g0169 328 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 325 - -
Gso12g0169 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 320 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0169 Gso-Chr12 1387128 1391790 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0169 1 326 Miscellaneous Gene Families AT5G19440 66.667 3.45e-167 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0169 - - gmx:100799213 657.521