Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0162 ATGATGGATTGCGGTGTTGGATCCATCGTGTGGGTGCGTCGGAGAAACGGGTCGTGGTGGCCGGGTCAAATCCTCGGCCCCGACGACCTCTCCGCCTCTCACCTCACCTCGCCCCGATCCGGAACCCCCGTCAAGCTCCTCGGCAGAGAAGACGCCAGCGTGGATTGGTACAATTTGGAGAAATCCAAGCGTGTGAAGGCATTCCGGTGTGGCGAGTTTGATGATTGTATTGAAAAGGCTGAAACCGCTCAGGGAGGGCCGTTGAAGAAACGAGAGAAGTATGCGCGCCGAGAAGACGCCATTCTCCATGCTCTTGAGCTTGAGAAACAGATTTCGAAGAAGCCAGGGAAATCAAGTGCTAGTTCATTGAATGCTGTTAAAAAGGTTGCGGTTGCGGTTGCATCGCCGCCCGAAACACTGGGAAATGATAATGAAAACCATGCAAATTTGAATGTGTATTGTGAAAATGAGACTGGTGGAGGTTCCTTTCCTTCCGAGGTTGCCAAGGATGGCAATCAACTGCATGTGGAAGTAGATTATTCTGAAACGACTCCTCGGATGAGAGACTTGCAGGATTTTGGGCTCAGAATCGCCCCTGCGAAAAAGAATCTTTCATCTTCTGTTGATCCATACTTTTCTCAGAAGCGGATTGTTGATGATGGTGCTCGGGCTCTTGCAAGTGGTGGTGGTATTCGTACGGGGAGTGCACTTCTCATGAATGGAGCTGGGCAAATAGCAGATTCCCGAGCAAAGAGGAGTAGATATGTGCACTTTCCGACTGAGTCTAGTGATTCTCTTGAATACAGAGAGACTCTACCCTGTGTTGAGATGTCACCTTCCCAACTCAGAAGGGAGTTTCCTTATCATGATTCTTTGGTTCGAGAGGCTGAATATACTTTTATGGATGATGCTGAATCTGATTCTTCAGAAACAGCCTCTACAGATTCTGATTCTGATTCTTCCGAGACAGAACCAGACATGGATGAAGAGATGACTATATTTTCAGAAACTGGTCATGATGCTGAAGAACACGAAAGTACTAGCAGTGAGGAGCTTGATGAATTGCCAATTTCCAATGACATGTCTCACCTTTATCCTCGTGACTTAATAACATGTAATGATGCTGTATCTAAATGGCAACTTAAAGGGAAAAGGAATAATCGGAATCTTGTAAAGAGGTCCGTTGGTGCTTCTGAAGGAAAATGTATTTTGGATGGAGCAGGAGCAGATGTTGAAGGAAGGAATGGTCATTTAAGGCACAATAGAAAGGGTCCAAGTTTGCACCGCTACAAATTTGATTTTGGTGATACTTTTGATGACGATGGTCAGATTTTTGGACTGGAAGATGAATACTCTCTAACTTCTAGATCTATATCAAAAAGTGGAAGTAAAATTCATCGTGGTGTAGCTTGGAATGATTTGGCCTGGGGTGACCATCTTGCTTCAAAAGGATATTGGGATGTTAAAGCATATTCTCCAATGCATGGTGATCGTTATGATTTTGGTGGGAGGGTGAGGTCGATGCTGGTTGATGTAGATTTGAAGGTTCAAGCAAGCTATAGGAAAGAGCATGTACCTTTCATTTCTCTGATGAGTAAATTAGATGGGAGGGCAATAGTAGGGCACCCAATTCAGGTTGAGGCTCTCAAGGATGGTTCATCTGATATTCTATTTCCTGCAACTGATGACTTCAGTAATGATGGGACTGCTATTGAGGGAACTAGCGTGCTTCCACCAGCATGGAGGACTGCAAGGAGAACTGCAAATTTTCGTGTGCGACGCCCCCATGTTCCATCTTCAAATGGTGTTGAAGTTGCTGCAGAGCTTCCCTCTTCAGATCAAGAACAAAACTTCGAATTTAGAAGTTTAAACTCTGGAAGTTCCAGTCACCAGGCTAGCCTTCAAAAGAAGAGTGGCCTTAAAAGTCATCGGTCTTCAGCTGACAGAAAGTCCTTAAAAAAGGTGCCAAAGAAATTGGGCTTGTCATCTAGCCAAAAAACTCGAACTCTGTCCTCATTATCTACTGAACATAATCTTAGTAGAAAGCCATTACATGATAGCAGTAGTTATCAAACAGATAGATTGACTAAACCAGAAATCTCTAGGCCCACTACAGTAGCTTGCATACCAGTCCAGTTAGTATTTAGTAGATTACTAGAGAAGATTAATAGGCCTCCATTGAAAACAGCTAGTAATGCGGCTTTGCTGTATACTGGTGTGTAG 2223 0.444 MMDCGVGSIVWVRRRNGSWWPGQILGPDDLSASHLTSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEFDDCIEKAETAQGGPLKKREKYARREDAILHALELEKQISKKPGKSSASSLNAVKKVAVAVASPPETLGNDNENHANLNVYCENETGGGSFPSEVAKDGNQLHVEVDYSETTPRMRDLQDFGLRIAPAKKNLSSSVDPYFSQKRIVDDGARALASGGGIRTGSALLMNGAGQIADSRAKRSRYVHFPTESSDSLEYRETLPCVEMSPSQLRREFPYHDSLVREAEYTFMDDAESDSSETASTDSDSDSSETEPDMDEEMTIFSETGHDAEEHESTSSEELDELPISNDMSHLYPRDLITCNDAVSKWQLKGKRNNRNLVKRSVGASEGKCILDGAGADVEGRNGHLRHNRKGPSLHRYKFDFGDTFDDDGQIFGLEDEYSLTSRSISKSGSKIHRGVAWNDLAWGDHLASKGYWDVKAYSPMHGDRYDFGGRVRSMLVDVDLKVQASYRKEHVPFISLMSKLDGRAIVGHPIQVEALKDGSSDILFPATDDFSNDGTAIEGTSVLPPAWRTARRTANFRVRRPHVPSSNGVEVAAELPSSDQEQNFEFRSLNSGSSSHQASLQKKSGLKSHRSSADRKSLKKVPKKLGLSSSQKTRTLSSLSTEHNLSRKPLHDSSSYQTDRLTKPEISRPTTVACIPVQLVFSRLLEKINRPPLKTASNAALLYTGV* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0162 740 ProSiteProfiles PWWP domain profile. 6 61 IPR000313 -
Gso12g0162 740 MobiDBLite consensus disorder prediction 302 327 - -
Gso12g0162 740 Gene3D - 2 117 - -
Gso12g0162 740 MobiDBLite consensus disorder prediction 658 697 - -
Gso12g0162 740 Pfam PWWP domain 7 87 IPR000313 -
Gso12g0162 740 MobiDBLite consensus disorder prediction 592 697 - -
Gso12g0162 740 MobiDBLite consensus disorder prediction 300 327 - -
Gso12g0162 740 PANTHER PWWP DOMAIN-CONTAINING PROTEIN-RELATED 241 739 - -
Gso12g0162 740 PANTHER PWWP DOMAIN-CONTAINING PROTEIN-RELATED 2 179 - -
Gso12g0162 740 MobiDBLite consensus disorder prediction 605 640 - -
Gso12g0162 740 PANTHER T17B22.17 PROTEIN-RELATED 2 179 IPR044679 -
Gso12g0162 740 PANTHER T17B22.17 PROTEIN-RELATED 241 739 IPR044679 -
Gso12g0162 740 SUPERFAMILY Tudor/PWWP/MBT 5 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0162 Gso-Chr12 1338087 1342307 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0162 - - gmx:102669790 1419.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0162 12 1338087 1342307 Gso11g0787 11 7067852 7071711 GST