Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0147 ATGGCGGTATCGGTGAAAGTCAGCAACATCTCTTCAACTGCAACCGAGCAAGATTTGAGGGAATTTCTTGCGTTTCCGGGAAAAATCGAATATATTGAAATGCAAAGTGATAAGGGAAATTCCCAAGTTGCGTATGTTACCTTCAGTAATCCAGAGGGGGCAGAAACTGCAGTTCTTCTCTCGGGGGCGGTGGTGTGTGGACAGTCTCTAACCATAGCTTTGGCTCCGGATCATGCTCTGCCTGCCTCTGCTGCATCTGTAGCAACACAGACTAGTAATGCTGAGAGTGGCGAATCTGGTTTGAGAAAGGCAGAGGATGTTGTAACCGGCTTGCTAGCAAAGGGCTTCATTTTGGGTAAAGATGCATTGAATCGAGCAAAATCCTTTGATGAAAGGCACCAGCTAACTTCCACGGCAACAGCAAAAGTTGTTTCTTTGGACCAGAAGGTTGGTTTCACTGAAAAGATCAGTGCCGGTACGGTTATAGTGAATGACAAAATGAAAGAAATGGATGAGAAATTTCAAGTGTCGGAGAAGACTAAATCTGCAATTTCAGTAGCTGAGCAGTCAGTGTCTAGTGCTGGATCTGCCATAATGAAGAATCGTTATGTGTTGACTGGGGCTACATGGGTAACGGGTGCTTACAGCAGGGTTGCTAAGGCAGCTGAGGAGGTGGGACAGAAAACTAAGGAGAAGGTTTTGGCCCAGGACAATCAAGGAAAAACTGAAGAAGGTGCTCATGTCCACACATCCATTTCTGAACCTAATCAACCATCCAAAACTGAACCTCAACAGGCAACCACAGCTAATCAGCCTTCCAAACCTGAACAACAGGCCACCAAGGATGGTCAACCTTCCAATTCTGCAACAACTAAGGATTGA 882 0.458 MAVSVKVSNISSTATEQDLREFLAFPGKIEYIEMQSDKGNSQVAYVTFSNPEGAETAVLLSGAVVCGQSLTIALAPDHALPASAASVATQTSNAESGESGLRKAEDVVTGLLAKGFILGKDALNRAKSFDERHQLTSTATAKVVSLDQKVGFTEKISAGTVIVNDKMKEMDEKFQVSEKTKSAISVAEQSVSSAGSAIMKNRYVLTGATWVTGAYSRVAKAAEEVGQKTKEKVLAQDNQGKTEEGAHVHTSISEPNQPSKTEPQQATTANQPSKPEQQATKDGQPSNSATTKD* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0147 293 MobiDBLite consensus disorder prediction 224 248 - -
Gso12g0147 293 MobiDBLite consensus disorder prediction 249 293 - -
Gso12g0147 293 SUPERFAMILY RNA-binding domain, RBD 4 77 IPR035979 GO:0003676
Gso12g0147 293 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 6 70 IPR000504 GO:0003723
Gso12g0147 293 PANTHER BINDING PARTNER OF ACD11 1 3 259 - -
Gso12g0147 293 MobiDBLite consensus disorder prediction 224 293 - -
Gso12g0147 293 Gene3D - 2 79 IPR012677 -
Gso12g0147 293 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 3 259 - -
Gso12g0147 293 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 3 77 IPR000504 GO:0003723
Gso12g0147 293 SMART rrm1_1 4 73 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0147 Gso-Chr12 1219935 1222545 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0147 - - gmx:100784398 554.673