Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0143 ATGACTTCAAAATCTAGACCCAATCTATCTGAAAATTCCAACAAAGGATCGATGGCAACTCCTAGAGCCAGTAAAGCTAGCAAAGTTGTATCCAAATCAGAATCTGAGTCACCATCACCACTGCAAAATTCGCGACTTTCTGTGGAACGATCACCACGATCTGTGAATTCAAAGCCCGCTGTTGAGCGGAAATCACCAAGACCCTCTGCCACCCCACTTGATAAACAACCCCCTAGAGCTGCAAAGGGTTCTGATTTGCAGAACCAATTGAATCTTGCTCAAGAAGACCTAAAGAAAGCAAAGGAGCTGCTTATTCAGGCTGAGAAGGAGAAGCTAAAAGCAATTGATGACTTGAAAGAAGCACAAAGAGTGGCTGAGGAAGCAAATGAGAAACTCCGGGAAGCATTGGTTGCTCAAAAACTCGCTGAGGAGAATTCTGAGATTGAGAAGTTCCGAGCTGTGGAATTGGAACAGGCTGGAATTGAAACTGTGAAGACGAAGGAAGAAGAATGGCAGAAAGAGATTGAAAGTGTGAGGAACCAACATGCTTTGGACATGGCTGCTCTTCTCTCCACCACTCAGGAGCTTCAGCAGGTTAAACAAGAACTCGCCATGACTTGTGATGCAAAGAACCAGGCATTGAATCATGCTGATGATGCAACTAAAATTGCCGAGATTCATGCAGAGAAAGCAGAGTTTTTATCAGCTGAGTTGATGCGATTGAAGGCCTTACTGGATTCAAAACTGGAAACAGAGGCCAGTGAAAATCAGGTTATATTTAAACTGAAAACAGAGATAGAAGCTCTCAAGGAAGAACTTGAAAAGGCAAAGGATTACGATGATAAGTTGTCAGAGAAAGAAACTTTTATTGAACAGCTTAATGTGGAGCTTGAAGCTTCAAAGATGGCTGAATCTTATTCACGTAGCCTGCTAGAGGAGTGGCATAAGAAGGTTGAGGAACTAGAAATGAGGATTGAAGAAGCAAACAAGCTGGAGAGATCTGCATCAGAGTCTTTGGAATCTGTAATGAAACAGCTTGAAGGAAACAATGATTTGTTGCAAGAAGCAGAATCTGAAGTTGCTACTCTTGAAGAGAAGGTGGGATTATTAGAAATGACAATTGGTAGACAGAGAGCAGATGTTGAGGATTCAGAACGCCAACTTCGTCTGGCTAAGGAAGAAAGTCTTGAAAAGTCAAAGGAAGTTGAGGCTCTGAAATCTGAACTTGAGAAGGTCAAGGAAGAGAAAGCACAGGCTTTGAACGATGAAAAGCTTGCTGCTTCTAGTGTGCAGGCCTTATTAGAAGAGAAAAACAAACTTATCAGTGAATTGGAGAATTCTCGGGATGAAGAAGAAAAAAGTAAAAAGGCAATGGAAAGCTTAGCTTCTGCATTACATGAAGTATCTGCAGAAGCTAGAGAAGCCAAAGAAAATCTACTAAACATCCAAGCTGAACGTGAAAGCTATGATGCCCAGATTGAAGACTTAAAGTTAGTCTTAAAAGCTACTAATGAAAAATATGAGTCCATGCTTGATGAGGCACGGCATGAGATTGATGTTCTTGTATGTAGTATTGAAAATTCTAAGAGTGCCTTTGAGAACTCCAAGGCTGAGTGGGAGCATAGAGAGCTTCAACTAGTCAGCTGCATAAAGAAAAATGAAGAAGAGAAGGTGTCCCTGGAAAAAGAAATAAAAAGATTGCTTTATTTGCTTAAAGAAACTGAGGAAGAAGCTAATGCCAACAGGGAGGAAGAAGATCAATTGAAGGAAAATCTGAAGGAAGTTGAGGCTGAGGCAATCCAACTGCAGGAAGCTCTTAAGGAAACAACAGCGGAGAACATGAAATTGAAGGAAAATTTATTGGATAAAGAAAATGAGTTGCAGAGTATGTTTCAAGAAAACGATGAACTCCGAAGTAGGGAAGCTGAATCTATCAAGAAGTTGGAGGAGTTATCTAAGTTGCTGGAAGAAGCTACAACCAGAAACCACACTGAGGAAAATGGGGATCTTACTGACAGTGAGAAGGACTATGATTTGCTTCCTAAAGTAGTTGAATTTTCTGAAGAGAATGGACTTGTAGGAGAGGACATTTCAAAGGTAGAGCTTTCAGTGAATCAGGAGGAACTCAAACAAAACAATATGCAGGAAGATAGCATTCTGTCCAACGACAAGGCTGAAAAAATTGAATCTCCCAAACATGAGGAAGTGAGTGGAAAACGGAAGGAAGATGAGACCAAAGAAAAGGAGGAGAGCAAAGAAAAGGATGATTCAGTAGAAGTTGAATATAAAATGTGGGAGAGCTGCAAGATAGAGAAAAAGGAGTTCTCGCCAGAGAGAGAAGCAGAGCCTGAATCATTTGAAGAGGAAGTTAACTCAAAAATAGAAAAAGGTGGCGAGAGCTTTGACAAGATAAATGGAAATGCTGTAACAGAGAACATTGATGAGAGTGGGAGTCCACCATCAAAACAAGAACAATTGAAGAAGAAGAAGAAGCCTTTGCTTGGCAAGTTCGGAAGCCTGCTCAAGAAGAAGGGTGCTAGCAACCAGAAATAG 2553 0.4101 MTSKSRPNLSENSNKGSMATPRASKASKVVSKSESESPSPLQNSRLSVERSPRSVNSKPAVERKSPRPSATPLDKQPPRAAKGSDLQNQLNLAQEDLKKAKELLIQAEKEKLKAIDDLKEAQRVAEEANEKLREALVAQKLAEENSEIEKFRAVELEQAGIETVKTKEEEWQKEIESVRNQHALDMAALLSTTQELQQVKQELAMTCDAKNQALNHADDATKIAEIHAEKAEFLSAELMRLKALLDSKLETEASENQVIFKLKTEIEALKEELEKAKDYDDKLSEKETFIEQLNVELEASKMAESYSRSLLEEWHKKVEELEMRIEEANKLERSASESLESVMKQLEGNNDLLQEAESEVATLEEKVGLLEMTIGRQRADVEDSERQLRLAKEESLEKSKEVEALKSELEKVKEEKAQALNDEKLAASSVQALLEEKNKLISELENSRDEEEKSKKAMESLASALHEVSAEAREAKENLLNIQAERESYDAQIEDLKLVLKATNEKYESMLDEARHEIDVLVCSIENSKSAFENSKAEWEHRELQLVSCIKKNEEEKVSLEKEIKRLLYLLKETEEEANANREEEDQLKENLKEVEAEAIQLQEALKETTAENMKLKENLLDKENELQSMFQENDELRSREAESIKKLEELSKLLEEATTRNHTEENGDLTDSEKDYDLLPKVVEFSEENGLVGEDISKVELSVNQEELKQNNMQEDSILSNDKAEKIESPKHEEVSGKRKEDETKEKEESKEKDDSVEVEYKMWESCKIEKKEFSPEREAEPESFEEEVNSKIEKGGESFDKINGNAVTENIDESGSPPSKQEQLKKKKKPLLGKFGSLLKKKGASNQK* 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0143 850 MobiDBLite consensus disorder prediction 708 850 - -
Gso12g0143 850 Coils Coil 311 422 - -
Gso12g0143 850 PANTHER WEB FAMILY PROTEIN-RELATED 11 847 - -
Gso12g0143 850 MobiDBLite consensus disorder prediction 805 820 - -
Gso12g0143 850 MobiDBLite consensus disorder prediction 720 800 - -
Gso12g0143 850 Coils Coil 427 517 - -
Gso12g0143 850 MobiDBLite consensus disorder prediction 1 88 - -
Gso12g0143 850 Coils Coil 83 145 - -
Gso12g0143 850 Coils Coil 259 286 - -
Gso12g0143 850 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 11 847 - -
Gso12g0143 850 MobiDBLite consensus disorder prediction 1 54 - -
Gso12g0143 850 Coils Coil 161 181 - -
Gso12g0143 850 Coils Coil 550 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0143 Gso-Chr12 1195459 1199520 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0143 - - gmx:100777446 1411.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0143 12 1195459 1199520 Gso11g0925 11 8314136 8318131 GST