Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0122 ATGGCCACCGTGGTGAGGATCCCAACAATCTCATGCATCCACATCCACACGTTCCGTTCCCAATCCCCTCGCACTTTCGCCAGAATCCGGGTCGGACCCAGGTCGTGGGCTCCTATTCGGGCATCGGCAGCGAGCTCGGAGAGAGGGGAGATAGTATTGGAGCAGAAGCCGAAGAAGGATGACAAGAACAAGCTGCAGAAGGGAATCGCAGAGTTTTACGACGAGTCGTCTGGCTTATGGGAGAACATTTGGGGCGACCACATGCACCATGGCTTTTATGACTCGGATTCCACTGTTTCGCTTTCGGATCATCGTGCTGCTCAGATCCGAATGATCCAAGAGTCTCTTCGCTTTGCCTCTGTTTCTGAGGAGCGTAGTAAATGGCCCAAGAGTATAGTTGATGTTGGGTGTGGCATAGGTGGCAGCTCTAGATACCTGGCCAAGAAATTTGGAGCAACCAGTGTAGGCATCACTCTGAGTCCTGTTCAAGCTCAAAGAGCAAATGCTCTTGCTGCTGCTCAAGGATTGGCTGATAAGGTTTCCTTTCAGGTTGCTGACGCTCTACAGCAACCATTCTCTGACGGCCAGTTTGATCTGGTGTGGTCCATGGAGAGTGGAGAGCATATGCCTGACAAAGCTAAGTTTGTTGGAGAGTTAGCTCGGGTAGCAGCACCAGGTGCCACTATAATAATAGTAACATGGTGCCACAGGGATCTTGGCCCTGACGAACAATCCTTACATCCATGGGAGCAAGATCTCTTAAAGAAGATTTGCGATGCATATTACCTCCCTGCCTGGTGCTCAACTTCTGATTATGTTAAGTTGCTCCAATCCCTGTCACTTCAGGACATCAAGTCAGAAGATTGGTCTCGCTTTGTTGCTCCATTTTGGCCAGCAGTGATACGCTCAGCCTTCACATGGAAGGGTCTAACTTCACTCTTGAGCAGTGGACAAAAAACGATAAAAGGAGCTTTGGCTATGCCATTGATGATAGAGGGATACAAGAAAGATCTAATTAAGTTTGCCATCATTACATGTCGAAAACCTGAATAA 1053 0.4872 MATVVRIPTISCIHIHTFRSQSPRTFARIRVGPRSWAPIRASAASSERGEIVLEQKPKKDDKNKLQKGIAEFYDESSGLWENIWGDHMHHGFYDSDSTVSLSDHRAAQIRMIQESLRFASVSEERSKWPKSIVDVGCGIGGSSRYLAKKFGATSVGITLSPVQAQRANALAAAQGLADKVSFQVADALQQPFSDGQFDLVWSMESGEHMPDKAKFVGELARVAAPGATIIIVTWCHRDLGPDEQSLHPWEQDLLKKICDAYYLPAWCSTSDYVKLLQSLSLQDIKSEDWSRFVAPFWPAVIRSAFTWKGLTSLLSSGQKTIKGALAMPLMIEGYKKDLIKFAIITCRKPE* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0122 350 PANTHER METHYLTRANSFERASE 58 345 - -
Gso12g0122 350 Pfam Methyltransferase domain 133 231 IPR013216 GO:0008168
Gso12g0122 350 Gene3D Vaccinia Virus protein VP39 50 345 IPR029063 -
Gso12g0122 350 PANTHER CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 58 345 - -
Gso12g0122 350 CDD AdoMet_MTases 132 234 - -
Gso12g0122 350 ProSiteProfiles SAM-dependent methyltransferase gamma-tocopherol (gTMT)-type family profile. 56 350 IPR025774 GO:0008168|GO:0032259
Gso12g0122 350 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 64 349 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0122 Gso-Chr12 1035105 1039361 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0122 130 235 Acyl Lipid Metabolism Gene Families AT1G73600 34.906 5.36e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0122 K05928 - gmx:732543 686.026