Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0121 ATGGCAGGGAAGGAGGAGAAGGAGGGGAAACTTCAGAAGGGAATCGCGGAGTTCTACGACGAGTCTTCTGGCTTATGGGAGAACATTTGGGGCGACCACATGCACCATGGCTTTTATGACCCGGATTCCACTGTTTCGCTTTCGGATCATCGTCTTGCTCAGATCCGAATGATCCAAGAGTCTCTTCGCTTTGCCTCTGTTTCTGAGGAGCGTAGTAAATGGCCCAAGAGTATAGTTGATGTTGGGTGTGGCATAGGTGGCAGCTCCAGATACCTGGCCAAGAAATTTGGAGCAACCAGCGTAGGCATTACTCTGAGTCCTGTTCAAGCTCAAAGAGCAAATGCTCTTGCTGCTGCTCAAGGATTGGATGATAAGGTTTCCTTTGAGGTTGCTGACGCTCTAAAGCAACCATTCCCGGATGGGAAATTTGATCTGGTGTGGTCCATGGAGAGTGGAGAGCATATGCCTGACAAAGCTAAGTTTGTTGGAGAATTAGCTCGGGTAGCAGCACCAGGTGCCACTATAATAATAGTAACATGGTGCCACAGGGAGCTTGGCCCTGATGAACAATCCTTACATCCATGGGAGCAAGATCTCTTGAAGAAGATTTGCGATGCATATTACCTTCCAGCTTGGTGCTCAGCTTCTGATTATGTCAAATTGCTCCAATCCCTGTCACTTCAGGACATCAAGTCAGAAGATTGGTCTCGCTTTGTTGCTCCCTTTTGGCCCGCAGTGATACGCTCCGCGTTGACATGGAATGGCCTCACTTCACTCTTGCGCAGTGGACTTAAAGCCATAAAGGGAGCTTTGGCTATGCCATTGATGATAAAAGGATACAAGAAGAATCTGATTAAGTTTGCCATCATTACATGTCGAAAGCCTGAATAA 891 0.4759 MAGKEEKEGKLQKGIAEFYDESSGLWENIWGDHMHHGFYDPDSTVSLSDHRLAQIRMIQESLRFASVSEERSKWPKSIVDVGCGIGGSSRYLAKKFGATSVGITLSPVQAQRANALAAAQGLDDKVSFEVADALKQPFPDGKFDLVWSMESGEHMPDKAKFVGELARVAAPGATIIIVTWCHRELGPDEQSLHPWEQDLLKKICDAYYLPAWCSASDYVKLLQSLSLQDIKSEDWSRFVAPFWPAVIRSALTWNGLTSLLRSGLKAIKGALAMPLMIKGYKKNLIKFAIITCRKPE* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0121 296 Pfam Methyltransferase domain 79 177 IPR013216 GO:0008168
Gso12g0121 296 PANTHER CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 3 290 - -
Gso12g0121 296 ProSiteProfiles SAM-dependent methyltransferase gamma-tocopherol (gTMT)-type family profile. 2 296 IPR025774 GO:0008168|GO:0032259
Gso12g0121 296 CDD AdoMet_MTases 78 180 - -
Gso12g0121 296 Gene3D Vaccinia Virus protein VP39 20 294 IPR029063 -
Gso12g0121 296 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 295 IPR029063 -
Gso12g0121 296 PANTHER METHYLTRANSFERASE 3 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0121 Gso-Chr12 1027535 1031042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0121 76 187 Acyl Lipid Metabolism Gene Families AT1G73600 36.607 3.50e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0121 K05928 - gmx:100778509 587.8