Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0117 ATGGCAAGGTCAGTGGTGGGGTCCTTACCCCTTTTTTCTCGCCCATACAATAACAATGTACTATTCACACCCCTCCACTTGTCCTTCTCCGCCCGCCACGTCACCTCCTCCGCCGTAACCATGCCCTCCTTCGAAGTCCTCGGCGGCGCACGTGACCGTTTTCTCCCTGTTCTCCCCCACTTGTCTCGCCCCTATCATGCTTTTCCTCTTCTCGCCGCCAACCGCCACATCGAAACCATCTTCGCCTCCTTCTTCCGCTCAGTCCCCGACGTCAGGCTCCGCCGCGAGTGCCTCAGGACCCAGGACGGCGGCGCCGTCGCCCTCGACTGGGTCTCCGGCGACGACCGTCGCTTGCCCCCCGATTCTCCACTCCTCATCTTGTTGCCAGGTTTAACCGGAGGTAGTGGGGATGCTTACGTGAGACACATGTTAGTTAGAGCTCGAAGCAAAGGTTGTCGTGTTGTCGTGTTTAATAGCCGCGGCTGTGGAGATAGCCCTGTTACTACTCCTCAGTTCTATTCGGCTTCATTTTTGGGAGATATGCGTGAGGTTGTTTCCCATGTCACTGGTAGATACCCCAATGCTAATGTATATGCCATAGGGTGGTCACTTGGGGCCAACATTCTTGTTCGTTACTTGGGTCAGGAATCGCACAATTGTCCACTTTCTGGTGCTGTATCGTTGTGTAATCCTTTCAATTTGGTTGTGGCTGATGAGGACTTCCGAAAGGGCTTTAACATTATTTATGACAAGGCCCTTTCAAAGGCTCTTCGCAAGATTTTCAACAAGCATGTTTTACTCTTTGAAGATATTGGTGGTGAATATAACATTCCACTGGCAGCCAATGCCAAGTCTGTTAGGGAGTTTGATGATGCACTGACCCGTGTTTCTTTTGGATTCAAGTCTGTGGACGAATACTATTCTAATTCAAGCAGTTCAGATTCCATAAAACATGTTAGAACCCCTTTGCTTTGCATCCAGGCAGCCAATGATCCGATTGCTCCAAATAGGGGAATTCCTCGTGAAGATATCGAGGAAAATCCAAACTGCTTGTTAATAGTGACACCCAAAGGTGGCCATCTAGGGTGGGTTGCTGGTGATGAAGCTCCACTGGGAGCTCCTTGGACTGATCCTTTGGTAATGGACTTTATTCAATATTTGGAGAGTGAAGCAGTTAAGACTCCAGAAACTAATAGTAATCCTGGTAGTAAAGAGACCTTGTACCATCTTGAAGTATAA 1239 0.4923 MARSVVGSLPLFSRPYNNNVLFTPLHLSFSARHVTSSAVTMPSFEVLGGARDRFLPVLPHLSRPYHAFPLLAANRHIETIFASFFRSVPDVRLRRECLRTQDGGAVALDWVSGDDRRLPPDSPLLILLPGLTGGSGDAYVRHMLVRARSKGCRVVVFNSRGCGDSPVTTPQFYSASFLGDMREVVSHVTGRYPNANVYAIGWSLGANILVRYLGQESHNCPLSGAVSLCNPFNLVVADEDFRKGFNIIYDKALSKALRKIFNKHVLLFEDIGGEYNIPLAANAKSVREFDDALTRVSFGFKSVDEYYSNSSSSDSIKHVRTPLLCIQAANDPIAPNRGIPREDIEENPNCLLIVTPKGGHLGWVAGDEAPLGAPWTDPLVMDFIQYLESEAVKTPETNSNPGSKETLYHLEV* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0117 412 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN-RELATED 41 397 - -
Gso12g0117 412 Gene3D alpha/beta hydrolase 92 386 IPR029058 -
Gso12g0117 412 SUPERFAMILY alpha/beta-Hydrolases 86 370 IPR029058 -
Gso12g0117 412 Pfam alpha/beta hydrolase fold 123 361 IPR000073 -
Gso12g0117 412 PANTHER ABHYDROLASE DOMAIN-CONTAINING PROTEIN 41 397 - -
Gso12g0117 412 ProSitePatterns Uncharacterized protein family UPF0017 signature. 290 331 IPR000952 -
Gso12g0117 412 PIRSF Ab_hydro_YheT 20 410 IPR012020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0117 Gso-Chr12 1001042 1004236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0117 94 388 Miscellaneous Gene Families AT2G03140 31.987 3.58e-41 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0117 - - gmx:100809859 802.357