Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0112 ATGGGTTCGACACCAGAAGTGTTGGCTCAGAGAAGTTGTGGCAAGCTCATTGGGACTCGATTGCTACAGTACTTAAATGGAGGTCCTCTCTCCTTCAAAACCCACCAAGCCATCGTTCTGATTGTAACATTTTTTGCTTATGCTAGTTACCATGCCACTAGAAAAACCACAAGTATTGTAAAGAGTGTCCTTGATCCCCAATCAGCAGCTACAGGCTTGACCTTCTTTCCATTTAGGCCAACCAATTTCACTGAGTCAAATGGATCAAAGAGACTTTCTTCCAACCTTGGAGATGGTTGGGCACCCTTTAATGGATCAGATGGGACATCCCTTCTTGGTGAATTGGATGTTGCTTTTCTTGCAGTGTATGCTTTTGGAATGTACTTTTCTGGACATTTTGGTGATAGGTGTAATTTGAGGATATTTCTAACAGTGGGGATGCTAGGAACTGGCTTGTTTACTTCACTGTTTGGGGTAGGGTACTGGGGAAACATCCACAACTTCTACTATTATTTAGTAGTTCAAATGATTGCTGGATTGTTTCAATCCACTGGATGGCCGTCCGTAGTTGCTGTTGTGGGTAACTGGTTTGGGAAGAGCAAGAGAGGGTTGATCATGGGAATTTGGAATGCTCACACTTCAATTGGGAACATTGCTGGTTCTTTGATTGCTTCTGCCATGTTGAGCTATGGATGGGGTTGGTCCTTTGTGGTGCCGGGACTAATAACTGCTTTCATCGGTTTGGCGGTTTTCCTTATATTGCCGGTCACACCCGAGTCAGTAGGAGCAAGAGAGGAAGATGAATTCAGTGGTCCTATTAAAAGTGGAGAAGAAGCGGCAGAGCCTCTGTTAAGGCAAGAGACTCCAGTTGAGGAGAAAGAAGCAGTTGGGTTCATAGAAGCATGGAAAATTCCGGGGGTTGCTCCCTTTGCTCTCTGTCTGTTTTTTGCCAAATTGGTCGCATATACGTTTCTCTATTGGCTCCCATTCTATGTTAGCCACACAGCAATTGATGGGAAATATCTATCTAGTGAGACATCAGGAACTCTATCCACTTTATTTGATGTTGGAGGGGTGCTGGGTGGAATTCTAGCCGGCCACATTTCTGATCACTTAGAGGCTAGAGCCATTACAGCAGCAAGTTTCATGTACTGTGCAATCCCAGCTCTCTTCTTCTATCGAAGTTATGGACATGTTTCTTTGATTGTAAATGGAGCATTGATGTTCGTCACTGGCATGTTTGTGAACGGGCCTTATGCTCTTATAACTACTGCAGTTTCAGCTGACCTGGGAACACATAAATCATTGAAGGGTAATTCACGAGCTCTAGCAACTGTCACAGCAATCATTGACGGAACCGGTTCTATTGGGGCTGCAGTTGGACCTTTGTTAACAGGTTACATATCTGCAAAGAGCTGGAGTGCTGTTTTCACAATGTTGATGGCAGCAGCTTTAATTGCAGGGCTGCTTTTGACCAGGCTAGTAGTGTCTGAGGTGGCCACAAAGATTGAAGAGTCGAGGTCTAATAGAGCACAAGACTGTTCACTTAATGTATAA 1557 0.4432 MGSTPEVLAQRSCGKLIGTRLLQYLNGGPLSFKTHQAIVLIVTFFAYASYHATRKTTSIVKSVLDPQSAATGLTFFPFRPTNFTESNGSKRLSSNLGDGWAPFNGSDGTSLLGELDVAFLAVYAFGMYFSGHFGDRCNLRIFLTVGMLGTGLFTSLFGVGYWGNIHNFYYYLVVQMIAGLFQSTGWPSVVAVVGNWFGKSKRGLIMGIWNAHTSIGNIAGSLIASAMLSYGWGWSFVVPGLITAFIGLAVFLILPVTPESVGAREEDEFSGPIKSGEEAAEPLLRQETPVEEKEAVGFIEAWKIPGVAPFALCLFFAKLVAYTFLYWLPFYVSHTAIDGKYLSSETSGTLSTLFDVGGVLGGILAGHISDHLEARAITAASFMYCAIPALFFYRSYGHVSLIVNGALMFVTGMFVNGPYALITTAVSADLGTHKSLKGNSRALATVTAIIDGTGSIGAAVGPLLTGYISAKSWSAVFTMLMAAALIAGLLLTRLVVSEVATKIEESRSNRAQDCSLNV* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0112 518 Gene3D MFS general substrate transporter like domains 30 270 IPR036259 -
Gso12g0112 518 SUPERFAMILY MFS general substrate transporter 109 495 IPR036259 -
Gso12g0112 518 ProSiteProfiles Major facilitator superfamily (MFS) profile. 41 500 IPR020846 GO:0022857
Gso12g0112 518 PIRSF Hexose_phosphate_transp 29 512 IPR000849 GO:0016021|GO:0022857|GO:0055085
Gso12g0112 518 Pfam Major Facilitator Superfamily 112 430 IPR011701 GO:0022857|GO:0055085
Gso12g0112 518 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 1 510 - -
Gso12g0112 518 PANTHER GLYCEROL-3-PHOSPHATE TRANSPORTER 1-RELATED 1 510 - -
Gso12g0112 518 Gene3D MFS general substrate transporter like domains 302 509 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0112 Gso-Chr12 957714 961820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0112 1 514 Organic Solute Cotransporters AT3G47420 72.640 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0112 K13783 - gmx:100799211 1013.06