Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0111 ATGGCGTCCTCTCTCATTGCGAAGCGCTTCCTCTCCTCTTCCCTCCTCTCCAGGTCCCTCCTTCGCCCCGCCGCTTCCGCTTCCCACCGCTCTTTCAACACCAACGCCATGCGCCAGTATGACAACCGCGCCGACGACCACAGCACCGACATCGATCGTCACTCCGAACGCTCTTTCCCTAGCACTGCGCGCCGCGACGATATCTTCTCAGGTAATGTGTTGGATCCATTTTTTCCGACTCGGAGTTTGAGCCAGGTTCTGAACATGATGGACCAGGTCATGGACAATCCGTTCCTCTCCGCGTCGCGCGGGATCGGAGCTGGCTCTGGAGTGCGTCGCGGATGGGACGCGAGGGAGACAGAGGATGCTCTGCATTTGCGCGTGGACATGCCTGGGCTCGGCAAGGAAGACGTGAAGATCTCCGTGGAGCAGAACACTCTCATTATCAAAGGTGAAGGTGCTAAAGAAGGCGATGAAGAAGAGAGCGCTCGTCGCTACACTAGCAGGATTGACTTGCCGGACAAGCTCTACAAGATTGACCAGATCAGAGCTGAGATGAAGAACGGTGTGCTCAAGGTCGTTGTGCCGAAAATGAAGGAGGAAGAGAGGAAAGACGTGATCAGTGTTAAGGTTGAGTAG 639 0.5587 MASSLIAKRFLSSSLLSRSLLRPAASASHRSFNTNAMRQYDNRADDHSTDIDRHSERSFPSTARRDDIFSGNVLDPFFPTRSLSQVLNMMDQVMDNPFLSASRGIGAGSGVRRGWDARETEDALHLRVDMPGLGKEDVKISVEQNTLIIKGEGAKEGDEEESARRYTSRIDLPDKLYKIDQIRAEMKNGVLKVVVPKMKEEERKDVISVKVE* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0111 212 CDD ACD_sHsps-like 116 197 - -
Gso12g0111 212 MobiDBLite consensus disorder prediction 32 63 - -
Gso12g0111 212 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 106 212 IPR002068 -
Gso12g0111 212 MobiDBLite consensus disorder prediction 40 63 - -
Gso12g0111 212 Gene3D - 68 211 IPR008978 -
Gso12g0111 212 PANTHER 23.6 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 211 - -
Gso12g0111 212 SUPERFAMILY HSP20-like chaperones 84 204 IPR008978 -
Gso12g0111 212 Pfam Hsp20/alpha crystallin family 117 211 IPR002068 -
Gso12g0111 212 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 211 IPR044656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0111 Gso-Chr12 948411 949751 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0111 K13993 - gmx:547852 375.941