Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0110 ATGATGCTGGATTTGGGTCCATTCTCGAATGAGAACTTCGACCCGAAGAAATGGATCAACTCAGCGTGTCAGAGTCGGCACCCTCAGGACTCTTTGGACAAACACCTGGTGGACATGGAGATGAAGCTCCAGATGGTGTCCGAGGAAATCGCCGCTTCGCTCGAGGAGCAGAGCGCCGCCGCTCTCCTCCGCGTCCCCCGCGCCACTCGCGACGTCATCCGCCTCCGTGACGATGCCGTTTCTCTCCGCTCCGCTGTCTCCTCCATCCTCCAGAAGCTCAAGAAGGCAGAGGGATCATCGGCTGAATCTATAGCTGCACTTGCTAAAGTGGATGTTGTCAAGCAGAGGATGGAAGCTGCATATGAAACGTTGCAGGATGCTGCGGGATTAACTCAATTGAGTGCAACCGTGGAGGATGTATTTGCCAGTGGAGATCTTCCTCGTGCTGCAGAAACGTTAGCTAACATGAGGCATTGCTTGTCTGCAGTTGGGGAGGTTGCTGAATTTGCCAACATAAGAAAGCAACTTGAAGTCTTGGAGGACAGGCTAGACAATATGGTGCAGCCTCGTCTTATGGATGCATTATCTAATCGCAAGGTTGATGCTGCTCAAGATTTACGTGGAATTCTCATTAGAATTGGAAGGTTTAAGTCTCTGGAATCACAATATGTAAAGGTTCACCTGAAACCAATAAAGCAGCTTTGGGAAGATTTTGATTCAAGAGAAAGAGCTAGTAAGCCTGCAAATGAGAAGAATGAGATGGATAGGACATCAAGTGGTGGTGATTTTCAGTCAGTTTCACCTGCAATACCATTCTCCAGTTGGCTACCAAGCTTTTATGATGAGCTACTACTTTATCTTGAACAAGAATGGAAATGGTGTATGATTGCTTTTCCTGAAGACTATAAAACTCTTGTCCCAAAGCTACTAAGTGAGACTATGATGGCTATAGGCTCCAGTTTCATATCTCGTATCAACCTTGCCATTGGAGATGCTGTTCCAGAAACAAAAGCACTGGCTAAAGGTTTGTTAGATATTTTAGCTGGTGATATGCAAAAGGGTATTAAGCTTCAGACAAAGCATCTGGAGGCCTTGATTGAATTACACAATATGACTGGGACCTTTGCAAGGAATATTCAGCACTTATTTTCTGTTTCTGATGTCCGGGTTTTAATGGATGTGCTTAAATCTGTGTACTTGCCTTATGAATCGTTTAAACAGAGATATGGACAAATGGAGCGTGCCATCCTTTCTGCTGAGATTGCAGGAGTAGATTTAAGAGGAGCTGTTATTCGAGGGTTGGGAGCCCAAGGTGTTGAACTCAGTGAAACAGTTCGCAGGATGGAGGAGTCTATTCCCCAAATAATTATACTTCTTGAAGCAGCTGCAGAGAGATGCATCAACTTCACTGGAGGTTCTGAGGCAGATGAGTTAATTCTTGCTCTTGATGACATAATGTTACAATACATTTCCACTCTGCAAGAAACTCTCAAGTCACTGAGAACTGTCTGTGGTGTGGATTATGGAAGTGATGGTACTTTTAAGAAGGACATGGAGAAGAAGGATGGAAACCAAAATGCTCGGAGAGTTGATTTGATCTCAAATGAGGAGGAATGGTCGATAGTCCAAGGGGCATTGCAGATCTTGACAGTTGCAGATAATTTGACAAGCAGGTCTTCTGTATTTGAAGCATCCTTAAGAGCTACTCTTGCTAGATTGAGCACAACTCTATCTTTTTCTGCATTTGGTTCAAGTTTAGACCAACACCAGGCTATAAATAGTAGTGTAGATGGGGAACCGTCTTATGGTGGAAGGGCTGCCTTAGATATGGCAACACTGCGGTTGGTTGATGTGCCTGAGAAAGCCAGGAAACTCTTTAACCTTTTGAATCAGTCTAAAGATCCTCGATTTCACGCACTTCCCGTTGCATCTCAAAGAGTTGCATCATTTACAGATACAGTTAATGAACTTGTATATGATGTCCTCATATCTAAAGTACGGCAACGCCTCAGTGACGTGTCCCGTTTGCCAATTTGGTCATCAGTTGAGGAACAAGGATCCTTTCCTCTCCCTACCTTCAGTGCATATCCACAGTCCTATGTCACCAGTGTTGGTGAATATCTTCTTACTTTACCCCAACAATTAGAGCCACTTGCTGAGGGAATCTCTAACAATGAAGTCAATGATGAAGCACAGTTCTTTGCAACTGAATGGATGTTCAAGGTTGCAGAGGGTGCAACTGCACTTTACATAGAGCAGTTGCGTGGGATTCAGTACATTTCAGATCGTGGAGCACAGCAGCTATCAGTTGATATTGAGTATCTTAGTAATGTGCTTTCTGCTCTGTCAATGCCAATCCCTCCAGTTCTGGCTACATTCCAAAGTTGTCTTTCTACTCCAAGAAACCAGCTAAAAGATCTTTTGAAGACAGATTCAGGAAACCAACTTGATATGCCAACAGCAAACCTCGTCTGTAAGATGCGACGAGTGAACTTGGATTCGTGA 2505 0.4427 MMLDLGPFSNENFDPKKWINSACQSRHPQDSLDKHLVDMEMKLQMVSEEIAASLEEQSAAALLRVPRATRDVIRLRDDAVSLRSAVSSILQKLKKAEGSSAESIAALAKVDVVKQRMEAAYETLQDAAGLTQLSATVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVLEDRLDNMVQPRLMDALSNRKVDAAQDLRGILIRIGRFKSLESQYVKVHLKPIKQLWEDFDSRERASKPANEKNEMDRTSSGGDFQSVSPAIPFSSWLPSFYDELLLYLEQEWKWCMIAFPEDYKTLVPKLLSETMMAIGSSFISRINLAIGDAVPETKALAKGLLDILAGDMQKGIKLQTKHLEALIELHNMTGTFARNIQHLFSVSDVRVLMDVLKSVYLPYESFKQRYGQMERAILSAEIAGVDLRGAVIRGLGAQGVELSETVRRMEESIPQIIILLEAAAERCINFTGGSEADELILALDDIMLQYISTLQETLKSLRTVCGVDYGSDGTFKKDMEKKDGNQNARRVDLISNEEEWSIVQGALQILTVADNLTSRSSVFEASLRATLARLSTTLSFSAFGSSLDQHQAINSSVDGEPSYGGRAALDMATLRLVDVPEKARKLFNLLNQSKDPRFHALPVASQRVASFTDTVNELVYDVLISKVRQRLSDVSRLPIWSSVEEQGSFPLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAEGISNNEVNDEAQFFATEWMFKVAEGATALYIEQLRGIQYISDRGAQQLSVDIEYLSNVLSALSMPIPPVLATFQSCLSTPRNQLKDLLKTDSGNQLDMPTANLVCKMRRVNLDS* 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0110 834 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 1 828 IPR019335 GO:0006886|GO:0017119
Gso12g0110 834 MobiDBLite consensus disorder prediction 242 257 - -
Gso12g0110 834 MobiDBLite consensus disorder prediction 242 262 - -
Gso12g0110 834 Pfam Golgi complex component 7 (COG7) 4 829 IPR019335 GO:0006886|GO:0017119
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0110 Gso-Chr12 936281 942833 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0110 K20294 - gmx:100794449 1580.07