Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0105 ATGGCGCTTAAAACCCTATCCACTTTCCTCTCACCTCTTTCTCTTCCCAACACCAAATTCCCGCAATTCCTCACCATCAAGCCTTCCCTCATTCTCTGCGAATTCCCTCGCTCTCAGAAATCGCGTTTGCTCGCCGCCGATTCGGAAGGCACCGGCGCCGCCGCTCCTTCTCCCGGCGAGAAGTTCCTCGAACGCCAGCAGTCCTTCGAAGATGCTAAGATCATTCTCAAAGAAAACAAGAAGAAGAGAAAGAAGAAAGACAATGCTATAAAAGCTTCTAGAGCCGTCGCTTCTTGCTACGGCTGCGGCGCTCCGTTACACACTTCCGATGCCGATGCCCCTGGCTACGTTGATCCCGAAACCTATGAATTGAAGAAGAAACACCACCAGCTTCGAACCGTTCTGTGTAGGCGGTGCCGGCTTTTGTCTCATGGCAAGATGATAACTGCCGTTGGAGGGCACGGAGGATATCCTGGCGGTAAATTATTCGTCACTGCTGAAGAGCTTCGAGAAAAGTTGTCTCACCTGCGTCACGAGAAAGCTCTAATCGTCAAATTGGTTGATATTGTTGACTTCAATGGCAGTTTTTTGTCTCGTGTGCGAGATCTTGCTGGTTCTAATCCAATAATATTGGTGGTGACTAAGGTTGATCTCCTTCCTAGAGATACTGATCTTCATTGTGTTGGGGATTGGGTTGTAGAGGCTACTATGAGAAAGAAGCTAAATGTTCTCAGTGTCCATCTGACCAGTTCCAAATCATTGGTTGGAATAACTGGAGTGATATCGGAAATCCAGAAAGAGAAGAAGGGACGAGATGTTTACATTCTGGGTTCAGCTAATGTTGGGAAATCTGCTTTCATCAATGCTTTACTAAAAACAATGGCTATAAATGATCCAGTGGCTGCATCTGCACAAAGATACAAACCAATACAATCTGCAGTTCCTGGAACTACCTTAGGGCCAATTCAAATTAATGCTTTCCTAGGAGGAGGGAAATTGTACGACACTCCTGGAGTTCATCTCTACCATAGGCAAACTGCAGTTGTTCATTCTGAAGATCTACCCATCCTTGCTCCACAAAGCCGACTGAGGGGCCTGTCTTTCCCAAGTTCTATAGTATCTTCAGTAGAGGAAGGAGCTTCCACCATAGTGAATGGCTTGAATGCATTTTCAATATTTTGGGGAGGTCTTGTTAGAATTGATGTCTTGAAGGTTCTCCCAGAAACTTGTTTGACATTTTATGGACCCAAGAGAATACCAATTCATATGGTACCCACAGAGCAAGCAGTTGAATTTTATCAGACAGAACTTGGAGTTCTGCTGACCCCACCAAGTGGAGGAGAAAATGCTGAGAACTGGAAAGGACTTGAATCAGAACGTAAATTGCTAATTAAATTTGAAGATGTGGACAGACCAGCTTGTGATATAGCTATATCAGGTCTAGGATGGTTTACTGTTGAGCCAGTTAGTCGGTCACTCAAAATCTCACAACCAAAACCGGTAGAGACTGCTGGGGAATTGATTTTGGCTGTGCACGTCCCCAAGGCTGTTGAGATTTTTGTGAGGTCACCAATACCAGTAGGCAAGGCTGGAGCAGAGTGGTACCAGTATGTAGAATTAACAGAGAAACAAGAGGAAATGAGACCAAAATGGTACTTTTAA 1662 0.4507 MALKTLSTFLSPLSLPNTKFPQFLTIKPSLILCEFPRSQKSRLLAADSEGTGAAAPSPGEKFLERQQSFEDAKIILKENKKKRKKKDNAIKASRAVASCYGCGAPLHTSDADAPGYVDPETYELKKKHHQLRTVLCRRCRLLSHGKMITAVGGHGGYPGGKLFVTAEELREKLSHLRHEKALIVKLVDIVDFNGSFLSRVRDLAGSNPIILVVTKVDLLPRDTDLHCVGDWVVEATMRKKLNVLSVHLTSSKSLVGITGVISEIQKEKKGRDVYILGSANVGKSAFINALLKTMAINDPVAASAQRYKPIQSAVPGTTLGPIQINAFLGGGKLYDTPGVHLYHRQTAVVHSEDLPILAPQSRLRGLSFPSSIVSSVEEGASTIVNGLNAFSIFWGGLVRIDVLKVLPETCLTFYGPKRIPIHMVPTEQAVEFYQTELGVLLTPPSGGENAENWKGLESERKLLIKFEDVDRPACDIAISGLGWFTVEPVSRSLKISQPKPVETAGELILAVHVPKAVEIFVRSPIPVGKAGAEWYQYVELTEKQEEMRPKWYF* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0105 553 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 166 342 IPR030378 GO:0005525
Gso12g0105 553 PANTHER NO-ASSOCIATED PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL 38 553 IPR044229 GO:0003924
Gso12g0105 553 CDD YqeH 136 339 - -
Gso12g0105 553 Pfam 50S ribosome-binding GTPase 273 340 IPR006073 GO:0005525
Gso12g0105 553 Gene3D - 167 343 IPR027417 -
Gso12g0105 553 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 343 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0105 Gso-Chr12 906659 912345 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0105 K13427 - gmx:100781340 1051.58