Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0067 ATGCACAACGCATTTCGCATTTCACAGCTACACCTTGTTTGTTCCGCTCGAAACGCAATCTTTGTCCCCGTGCGGTGCCCTTGCCGATTCTTCCATTTTCAAGTTACTCTTAACCTCCTTTTGCTTCTAGTTTTCACTCTCAATTTTTTTTTTTTTTTTTTTTTGCGTTTTCGGTTTCCGAAGCAGGTTTTAGGTCGGTTGGGGTTTTTGGTTTTCGAATCCAATCTCAACTCGTTAACGTTAAGAATAATTCAGGTCAGCATGGGATTTGACAATGAGTGCATAGTGAACATTCAGTCACTTGCTGGAGAGTACTTCTGTCCAGTTTGTCGGCTGCTCGTATTTCCAAATGAAGCTTTGCAGTCACAATGTACTCATTTATATTGCAAGCCGTGTTTGACCTACGTTGTGAGCACTACAAGGGCTTGCCCATATGATGGCTACTTGGTCACTGAGGCAGATTCCAAGCCTCTGACAGAGTCAAATAAGGCACTTGCTGAAACTATTGGAAAAATCGCAGTTCATTGCCTTTATCATAGGAGCGGATGCACATGGCAAGGAACTTTGTCTGAGTGCACATCTCATTGTTCTGTATGTGCTTTTGGCAATTCTCCTGTTGTTTGCAACAGGTGTGGGATCCAAATAGTGCATTGCCAAGTACAAGAACATGCACAAAATTGCCCTGGTGTGCCAGGTCAAGTAGCCATTACCCAAGATCCTTCAGCTACTAGTGCTGTCTCTTCTACAGATCAGAATCAGAATGCTGCTCCAGTTGCAGCAACGGCATCTCAAACTGCTGTCACAACTACTATACCCGGGCAGGTTTCAAATCAGCCACCCAACCCAGCTTCCCAAACCCAAGCTCCAGTCCAAACTGCTGGGCAGCCAACTGCAGAGCAATGGTATCAGCAGCAACAATATCAACAATACTACCAGCAATACCCTGGACAAGATCCATACCAACAGCAGTATCAACATTACTACCCCTATCAACAGTCTGTGGTTCCACAGTACCAGCAGGCCTATGGTCAGCCCCAACCTCAGTCTCAATCACAGCCCCAGGGCCAGCTTCAACCTCAGTCCCAGCCACAGCCTCAACTTCAACCACAACCTCAGGCACAAGGACTGTCTCATCCACCTACACATATTCAGGCTCCTGTGGTCCCACCATCTCAGAATCAGATGCAAGTTCAACAACCACCACAGCAACTTCAACCTGCTGTGCAGCCACAAGGTCAGATGAGTCATGCACCAGGCCATGGTCAAGCCATCCCCCAGTCTCAGACTCAGCCTTATCCTTACCCCCAAGTTCAGCCACATTCTGTCCAACCTCAACCCCAACAACCGATGCAAATGCTTCCTTATCAGCAGCCTCATCCTCAAATGCAGCATTCACAACCACAAATTCAACAACCGGTTCAGAAGTATCCTGTTCCTCAATCTCAAGTTCATGCACAACTGCAACCTAATGCTCCAATTCAACATCACTCTCAGCTCCCCGTGCCTCCTCACCAGCCTGTGACTCCTAATGTCCAGACTCCAGTGCAAAATGCAATGTCGCATTCAGTGACAGGGCATCACTCTTATCCCCAACCTCTGCCTCACCCAAATATGCAACCCGGAGTCCCTCAACATACTATGCACATGCATCCTCAAAGTGGGCATCAACCCCAGGCCCAACATCCTGTCCAGATGCAGAATCAGTTTCCTCCACAAATTCCAACAGCACGTCCTAATCAATCTCATGCTATGTTTCCTAACCAGCAACAGCCAGCTTTGTTGCCTTCTTCAGTTCAGGGCCAAACTACCCCTCCTTTGCAACAACAGTCACTATATACCCATAATCAACAACCTGGGCAAATCAACCAACGTCCTACTTTGCCACCTGTTCAACAAATACCTCAGCAGCCGTTTGCACAACACCAAATGCCTATGCCATCTCATTTACAACCACAAGGTCCAGCACATTCATTTCCAAAGCATGCATATCCACAGGCACAGGGAAATACTGCAGGAAGGCCTTTAGTTCCCAATTATGCCGGACACCTACAGCCATTTGCACAATCTGCCAATACCATTCCAGTTAGACCTGGGCAAAATGGTGCTGGCTACCTGCCTGAAAATCAGAAATTGTTGGTTGGGGCCAATAATCAAGTACAGTTGCCTTCTGAATTGCAGTCTAGGGCACCAGAATCAATTGAAAGACAAGGTAATGTTGTTGAGCAACAAACTGACTCTGCCTCTGGGAAACTTGGTAAAGTTTTTAAAGATTTGGACAATGTGTCTGGATCATCAAATGAATTGAAATCTGAAAAAGTTGAAGCAGATTTGCAACCAACAGAGGTTGGAAATAAGCAAAATAGTGAAGATCCAGACTCTCTGAAGACTTCAGTCCCAAATACCAATGCAGTAGAAAATGGTGATTCTGTGAATAAGAATCTTGGGATGGCGGAGGCTGCTGAAAGCAATTGGAAGCCTTCAAGTGGTGCAACGCCTGGGGTTCAAAATGATAGTAATGAGCATTCTGTCCAAGGCAATGAATTTCAAGATGGACATCTGCCAAAGATAGAGACGAAACTCCCTTTGTCAGAAACTGATAAATTGCATAATGATGACAATCCTGAACCATCTGTCTCTCAAAGCAATGGCGGTTTTGCTAAGCTGTCTCACTCAGCCGCTTTCACTGATCAGAGTAAGCATCAGCAACCAATAATTAATTATGGCCCTCCTTCTGTCCAGCAGAGATCTTCTGCAATGTTAGCATCGCAATTGCCACATCCAACAGTTCCAAATCAGCCACTCTCTTCAGTGCACTCTTCAACCCTTATTAGGAATCATGGAACTGCCCCTGCTCTTCATTCAGGACAGCTCTTAACCGAGAATTTTCCACCAACCATGCTTAAGCAACCACAAGATTCTGGCATTCAGTTTAATAATCCAGGGCGAAGCTTGCAACCTCAGTCTCTTGGACCCCCACCACCATTTAACCAAGTACATGGGCCTCCTTTCCATGCTGGAGCATCTAATTTGTCTCGTCTTGGAGGGCCTCAACTTGGTGCCCCACTTCCTGGAGATATGCATGGTCGAATGACTGCCAACTTACCACCACATGCTCCTGAAGGTTTTGGTTTGCAGGATGAAAGGTTCAAACCTTTGCATGCTCTAAATCAACAAAATATTGAGAGAAGAGAGTTTGATGATGATCTTAAGAAATTCTCTAGGCTGCCTTTGAATTCCGAGCCAGTTTCTAAATTTGGAAATTATTCATTAGGCACTCATGAAGCTGGAAAGAGACCAGTTGGTATTCATGATGATGTCATTAAGAAATCAGGTTCTGCTCTTCATCCTGGTTATTTTGGACCAGGTCCTGGATATGCGAGACATCATATGGATGGTATAGCTCCAAGAAGTCCTGTTAGTGAATATGCTGAGATGTCCTCCCGGAGATTGGGGCTGCACTCTGGCAGTCTTGTTGGTAAGTCAGGTATAGATGATTTTGATGACAGAGTTGCACGTCGTTTTGGTGAATTCCGTGATAGTCGGTTTCCTCATTTGCCCAGCCATTTGCGTAGAGATGATTTTGATGGTTTTGGTAACTTTCGAATGGGTGAATATCCAAGGAGTGGTGATTTTGTTGGTCAAGATGAATTTGCTGGCCATTTTCGGAGGGGTGAACATTTGGGTCCACATAACTTCCCCAGACATTTGCAGCATGGGGAGCCTATTGGTTTTGGTGCCCACCCTGGTCATATGAGAGCAGTTGAACTTGATGGTTTTCGTAGTTTTGAATCTTTCAGCAAAGGTGGCCGACCAGGTCATCCGCAACTTGGTGAGCCTGGGTTCAGAAGCAGCTTTTCACTTACTGGATTTCCTAATGATGCTGGATTTTTAACAGGAGATATCAGGTCGTTTGATAATTTGAGGAGAAAGAAGGCTTCTAGCATGGGTTGGTGCCGGATATGTAAAGTTGACTGTGAAACAGTAGAAGGTTTGGACTTGCATTCACAAACAAAGGAGCACCAGAAGATGGCCATGGATATAGTTAAAACAATCAAACAAAATGCAAAGAAACAGAAATTAATACCCAGTGAAGAACCCTCAATGGATGAGGGAAACAAGACACACAATACTGGTATTGAGGGTCGTGGAAATAAGCATTGA 4161 0.4525 MHNAFRISQLHLVCSARNAIFVPVRCPCRFFHFQVTLNLLLLLVFTLNFFFFFFLRFRFPKQVLGRLGFLVFESNLNSLTLRIIQVSMGFDNECIVNIQSLAGEYFCPVCRLLVFPNEALQSQCTHLYCKPCLTYVVSTTRACPYDGYLVTEADSKPLTESNKALAETIGKIAVHCLYHRSGCTWQGTLSECTSHCSVCAFGNSPVVCNRCGIQIVHCQVQEHAQNCPGVPGQVAITQDPSATSAVSSTDQNQNAAPVAATASQTAVTTTIPGQVSNQPPNPASQTQAPVQTAGQPTAEQWYQQQQYQQYYQQYPGQDPYQQQYQHYYPYQQSVVPQYQQAYGQPQPQSQSQPQGQLQPQSQPQPQLQPQPQAQGLSHPPTHIQAPVVPPSQNQMQVQQPPQQLQPAVQPQGQMSHAPGHGQAIPQSQTQPYPYPQVQPHSVQPQPQQPMQMLPYQQPHPQMQHSQPQIQQPVQKYPVPQSQVHAQLQPNAPIQHHSQLPVPPHQPVTPNVQTPVQNAMSHSVTGHHSYPQPLPHPNMQPGVPQHTMHMHPQSGHQPQAQHPVQMQNQFPPQIPTARPNQSHAMFPNQQQPALLPSSVQGQTTPPLQQQSLYTHNQQPGQINQRPTLPPVQQIPQQPFAQHQMPMPSHLQPQGPAHSFPKHAYPQAQGNTAGRPLVPNYAGHLQPFAQSANTIPVRPGQNGAGYLPENQKLLVGANNQVQLPSELQSRAPESIERQGNVVEQQTDSASGKLGKVFKDLDNVSGSSNELKSEKVEADLQPTEVGNKQNSEDPDSLKTSVPNTNAVENGDSVNKNLGMAEAAESNWKPSSGATPGVQNDSNEHSVQGNEFQDGHLPKIETKLPLSETDKLHNDDNPEPSVSQSNGGFAKLSHSAAFTDQSKHQQPIINYGPPSVQQRSSAMLASQLPHPTVPNQPLSSVHSSTLIRNHGTAPALHSGQLLTENFPPTMLKQPQDSGIQFNNPGRSLQPQSLGPPPPFNQVHGPPFHAGASNLSRLGGPQLGAPLPGDMHGRMTANLPPHAPEGFGLQDERFKPLHALNQQNIERREFDDDLKKFSRLPLNSEPVSKFGNYSLGTHEAGKRPVGIHDDVIKKSGSALHPGYFGPGPGYARHHMDGIAPRSPVSEYAEMSSRRLGLHSGSLVGKSGIDDFDDRVARRFGEFRDSRFPHLPSHLRRDDFDGFGNFRMGEYPRSGDFVGQDEFAGHFRRGEHLGPHNFPRHLQHGEPIGFGAHPGHMRAVELDGFRSFESFSKGGRPGHPQLGEPGFRSSFSLTGFPNDAGFLTGDIRSFDNLRRKKASSMGWCRICKVDCETVEGLDLHSQTKEHQKMAMDIVKTIKQNAKKQKLIPSEEPSMDEGNKTHNTGIEGRGNKH* 1387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0067 1386 MobiDBLite consensus disorder prediction 241 299 - -
Gso12g0067 1386 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 91 210 IPR013083 -
Gso12g0067 1386 SUPERFAMILY RING/U-box 100 160 - -
Gso12g0067 1386 ProSiteProfiles Zinc finger RING-type profile. 107 146 IPR001841 -
Gso12g0067 1386 MobiDBLite consensus disorder prediction 973 1016 - -
Gso12g0067 1386 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1A-LIKE 88 1385 - -
Gso12g0067 1386 MobiDBLite consensus disorder prediction 780 809 - -
Gso12g0067 1386 MobiDBLite consensus disorder prediction 519 563 - -
Gso12g0067 1386 MobiDBLite consensus disorder prediction 549 563 - -
Gso12g0067 1386 MobiDBLite consensus disorder prediction 340 483 - -
Gso12g0067 1386 MobiDBLite consensus disorder prediction 387 436 - -
Gso12g0067 1386 MobiDBLite consensus disorder prediction 443 483 - -
Gso12g0067 1386 MobiDBLite consensus disorder prediction 729 853 - -
Gso12g0067 1386 MobiDBLite consensus disorder prediction 824 846 - -
Gso12g0067 1386 MobiDBLite consensus disorder prediction 865 885 - -
Gso12g0067 1386 MobiDBLite consensus disorder prediction 1353 1386 - -
Gso12g0067 1386 ProSitePatterns Zinc finger RING-type signature. 124 133 IPR017907 -
Gso12g0067 1386 MobiDBLite consensus disorder prediction 340 379 - -
Gso12g0067 1386 MobiDBLite consensus disorder prediction 637 680 - -
Gso12g0067 1386 MobiDBLite consensus disorder prediction 729 749 - -
Gso12g0067 1386 MobiDBLite consensus disorder prediction 1358 1386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0067 Gso-Chr12 569019 574780 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0067 - - gsj:114380210 2464.11