Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0057 ATGTCGTTTCGGTCGGAGAACGTGAACCCTAACCCTAGTCCCACTCCTCCATTGAAGAAGCGGTGGTCAGACATATGGACGAAATCGAAACCCCTAAACCAAATGGTAATGGCGATGAAGCTCCACTCCCTCTCTTCTTCTCCTCGCATCAGCACCACCGACAAAACCAACCCTATTCTCTCCCCATTCCCCATCACCGATCGAACCCTTCTCTTATCCGACGCACTTCTCCTCAAAATCATTGCACTAGTCTCCGATTCCTCCACTCAGCGAAACTCAAACTCTCTGGTCTGCAAGCGGTGGCTCAACCTCCAAGGCCGCCTCGTCCGCTCCCTCAGAATCTCCGACTGGAACTTCCTCCTCTCCGGCAGACTCATCCACCGCTTCCCCAATCTCAACCACGTCGATTTGCTCTCCGCCGCCTTAATCTCCCCCAAAAATTCGGGCATTCTCTTAAGCAACCGCGTCATTTCCATGCACCTCGATTCAAACTCTTCCCCTAATTGGTGCTTCTTCGAGGACAACATGCTCCCCGTCGAAGTCATCGACAACGGCCTCACCTCCCTCGCCAGCGGCTGCCCTAATTTGCGCCGCCTCCACGTCATCGGCACCACCGAGATCGGCCTGCTCACCGTCGCCGAGGAGTGCTCCACTCTGCAGGAACTCGAATTGCAGCGCTGCAGCGACAATGTTCTGCGCGGGATCGCCGCGTGTGGGAATCTGCAGATTCTGAAACTCGTTGGGCACGTTGATGGGTTCTACGATTCGGTGGTGTCTGATATTGGGTTGACTATTCTTGCTCAGGGGTGCAAGAGGCTCGTCAAGTTGGAGCTTAGTGGCTGTGAGGGGAGCTTTGATGGGATTAAGGCTATTGGGAAGTGTTGCCAAATGTTGGAGGAGTTGACCTTCTCTGATCATAGGATGGATGACGGGTGGCTCGCCGCAATTTCGTACTGCGAGAATTTGAAGACTTTGAGGTTTCAGTCTTGTAAGAAGATCGATCCCAATCCGGGTATGGAGGAGTATTTGGGTTGTTGCCCCGCGCTCGAACGGTTGCATTTGCAGAAATGTCAGTTGCGGGATAGGAAGAGTGTCGTGGCTTTGTTTTCGGTGTGCAGGGCTGTTAGGGAAATTGTTATTCAGGACTGCTGGGGATTGGATAATAGCATGTTCAGTCTTGCAATGATTTGCTGGCGGGTAAAGTTGTTATACTTAGAAGGGTGCTCATTGCTAACAACAGAAGGTTTGGAGTCTGTGATTCATTCGTGGAAGGATCTTCAGAGCCTTAGAGTAGTGTCATGTAAGAATATAAAGGACAATGAGATCTCTCCTGCGCTTGCAACCTTGTTCACCACTCTCAAGGAATTGAGATGGAGCCCAGATACCAAATCACTTCTTCCATCCAGTGTTAAGGGGATAACCATGGGAAAGAAAGGTGGTAAATTTTTCAAAAGGGCACGATAA 1464 0.5096 MSFRSENVNPNPSPTPPLKKRWSDIWTKSKPLNQMVMAMKLHSLSSSPRISTTDKTNPILSPFPITDRTLLLSDALLLKIIALVSDSSTQRNSNSLVCKRWLNLQGRLVRSLRISDWNFLLSGRLIHRFPNLNHVDLLSAALISPKNSGILLSNRVISMHLDSNSSPNWCFFEDNMLPVEVIDNGLTSLASGCPNLRRLHVIGTTEIGLLTVAEECSTLQELELQRCSDNVLRGIAACGNLQILKLVGHVDGFYDSVVSDIGLTILAQGCKRLVKLELSGCEGSFDGIKAIGKCCQMLEELTFSDHRMDDGWLAAISYCENLKTLRFQSCKKIDPNPGMEEYLGCCPALERLHLQKCQLRDRKSVVALFSVCRAVREIVIQDCWGLDNSMFSLAMICWRVKLLYLEGCSLLTTEGLESVIHSWKDLQSLRVVSCKNIKDNEISPALATLFTTLKELRWSPDTKSLLPSSVKGITMGKKGGKFFKRAR* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0057 487 PANTHER UNCHARACTERIZED 49 467 - -
Gso12g0057 487 SUPERFAMILY RNI-like 229 458 - -
Gso12g0057 487 MobiDBLite consensus disorder prediction 1 21 - -
Gso12g0057 487 SMART LRR_CC_2 238 269 IPR006553 -
Gso12g0057 487 SMART LRR_CC_2 270 294 IPR006553 -
Gso12g0057 487 SMART LRR_CC_2 346 371 IPR006553 -
Gso12g0057 487 SMART LRR_CC_2 193 218 IPR006553 -
Gso12g0057 487 SMART LRR_CC_2 397 422 IPR006553 -
Gso12g0057 487 PANTHER F-BOX PLANT-LIKE PROTEIN 49 467 - -
Gso12g0057 487 SUPERFAMILY RNI-like 98 248 - -
Gso12g0057 487 Gene3D Ribonuclease Inhibitor 286 475 IPR032675 -
Gso12g0057 487 Gene3D Ribonuclease Inhibitor 68 285 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0057 Gso-Chr12 492006 494535 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0057 K10268 - gmx:100812193 953.355