Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0054 ATGTCGAAGGATAAAGACGCTACCAATCTTTCACGCACCTTCAAGTACCTATTAGCTACTCAGTTCTTATCAAGAGGAATTCCATTCATATTCAATACATGGATTGTAAGGCATCTTACACAAGAGGACTATGCGCTGTATGCAGTGCAGTTTCATCTGTTAGTCACATGTATTTTATTTCTTAGCCGGGAGGGCTTTCGACGAGCATGCTTGCGGATGGACCTCAAATGTGATGGCACTTCAATGGGAGATGTTGTGAAGCTAATGAAAGTAGTGTGGATGAGTTTTCCACTTGGAATATTTATTACAGTTGTAGTATGCCTTTTTGTCTTCTGGTGGCAACAAATAAGTTATTCTAGTCCACATGGGCAAGCTATCTTGATCAATGGTTTTGCATGCATTTTGGAGCTCCTGGCTGAGCCGGTGTATATTCTTTCACAGAACTTGGTCTTGCTTGAATTACGGCTGATGGTTGAGACTGTTGCTACTCTGTCGTGGTGCTTGACAATGTATTTTCTAATTGTGAAGCAAACTGGAATTGAAAAATCAATCATATTTGCATTGTCACAGTCTGCATATGGAGCTTGCTTATTTCTTGGTTATTGGGGCTATCTTTTGCTTTCCCAAAAATTTAGGGTTTCTTACCTTTTTCCATTCAGAGAAGGAAAAGTGATTGATTTTGACCGGCAGTTGTCCAAGATGTGTATGCTGTTTACCTTTCAATCCTTTCGAAAATTGATCCTTCAGGAAGGAGAAAAGATAGTACTTGTATGGTTGGATACACCATATAATCAAGCAGTATATGGCCTTGTGGACAAGTTTGGTAGCTTAGTGGTGAGACTTGTCTTTTTACCTTTTGAAGAAAGTTCATATGCAACATTTGCCAGGTCCGCTTCAGGACAATATCCAGGAAAAAGCAAGAAATTGGGAAACGGCGTGACAGAATCTCTGAAGTTAGTTTTGTTGATTGGCCTTGTTTTTATGGCATTTGGTCCAAGTTATTCTTATTCACTCATTAGATTGCTTTATGGTGAAAAATGGAGTGATGGAGAAGCATCAACTGCCCTCCGCTGTTATTGCTTTTATGTCATTGTTTTGGCCATGAATGGAACCTCTGAAGCCTTTATGCATGCAGTTGCAACAGAGAGCCAACTCAAGCGTTCAAATGATTCACTACTTGTTTTCTCTTTGATCTATATAGTTTTGAATGTTCTGCTAATAAGGTCAGCTGGGGCAGTTGGCTTGATTATGGCAAATTCTCTCAATATGACCTTGAGGATTTTATACTCTGCCATATTCATAAAGAATTACTTCCAGGGATCTTCCTCGTTTTCTTTCTATGGTTGCTTGCCGTCAGGATGGATTGCTCTGTTACTTTCAGGCGTAATCACTCTCATTTCTGAGAATGTACTTTTGGACCGAGATAATTTCTAG 1434 0.3961 MSKDKDATNLSRTFKYLLATQFLSRGIPFIFNTWIVRHLTQEDYALYAVQFHLLVTCILFLSREGFRRACLRMDLKCDGTSMGDVVKLMKVVWMSFPLGIFITVVVCLFVFWWQQISYSSPHGQAILINGFACILELLAEPVYILSQNLVLLELRLMVETVATLSWCLTMYFLIVKQTGIEKSIIFALSQSAYGACLFLGYWGYLLLSQKFRVSYLFPFREGKVIDFDRQLSKMCMLFTFQSFRKLILQEGEKIVLVWLDTPYNQAVYGLVDKFGSLVVRLVFLPFEESSYATFARSASGQYPGKSKKLGNGVTESLKLVLLIGLVFMAFGPSYSYSLIRLLYGEKWSDGEASTALRCYCFYVIVLAMNGTSEAFMHAVATESQLKRSNDSLLVFSLIYIVLNVLLIRSAGAVGLIMANSLNMTLRILYSAIFIKNYFQGSSSFSFYGCLPSGWIALLLSGVITLISENVLLDRDNF* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0054 477 Pfam Rft protein 13 462 IPR007594 GO:0006488|GO:0016021
Gso12g0054 477 PANTHER ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED 4 477 IPR007594 GO:0006488|GO:0016021
Gso12g0054 477 CDD MATE_rft1 9 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0054 Gso-Chr12 458697 465732 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0054 K06316 - gmx:100811128 934.48