Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0050 ATGGTTCTGACTCAGAAGCTTCACGAAGCCTTCAAAGGCACCGTCGAGAGGATTACTGGCCCCCGAACCGTTTCCGCCTTCAAAGAAAAAGGAGTTCTCAGTGTCTCTGAGTTCGTCACCGCTGGCGATAATCTCGTTGCCAAATGCCCCACCTGGTCCTGGGAATCGGGTGATCCAGGCAAGAGGAAGCCATACTTGCCGCCTGAGAAACAGTTCTTGATTACTAGAAATGTGCCTTGTCTTCGGAGAGCTGCATCTGTTGAAGAGGAATATGAAGCTGCTGGAGGGGAAGTTCTACTCGATGATGAAGATAATGATGGCTGGCTAGCAACTCATGGGAAACCCAAAGAAACCAAATCTGATGAGGATGAAAATTTACCTTCCATGGAAAGCCTAGAAATCAGCAAAAAGGGTTCTATTAAGCAAATTCATTCCTACATGGGAGCTGAAGAGGGAGAAGATATTCCAGATATGGCAGAGTTTGACGATACTTCCAATGTTGAAAATGATCCTGCCACTCTTCAGTCCACATATTTAGTTGCTCATGAACCTGATGACGATAATATTCTTCGAACTCGGACTTACGATGTCAGCATCACGTATGATAAATATTATCAAACACCACGAGTATGGCTTACTGGGTATGACGAGTCAAGGATGCTTTTGCAACCAGAACTTGTTCTTGAAGATGTTAGTCAAGACCATGCACGCAAAACGGTAACAATTGAGGACCATCCTCACTTGCCAGGGAAGCATGCATCTATTCATCCATGTCGACATGGAGCAGTGATGAAGAAAATCATTGATGTGTTGATGTCACGCGGAGTTGAGCCTGAAGTTGACAAGTACCTATTTTTATTCCTAAAATTTATGGCTTCTGTAATTCCAACAATTGAGTATGATTACACGATGGACTTTGATCTTGGTAGCTCCAGCAATTGA 942 0.4395 MVLTQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVTAGDNLVAKCPTWSWESGDPGKRKPYLPPEKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDDEDNDGWLATHGKPKETKSDEDENLPSMESLEISKKGSIKQIHSYMGAEEGEDIPDMAEFDDTSNVENDPATLQSTYLVAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHARKTVTIEDHPHLPGKHASIHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPTIEYDYTMDFDLGSSSN* 314
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0050 313 MobiDBLite consensus disorder prediction 103 130 - -
Gso12g0050 313 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 1 308 - -
Gso12g0050 313 Gene3D - 153 298 - -
Gso12g0050 313 MobiDBLite consensus disorder prediction 105 130 - -
Gso12g0050 313 Pfam Autophagocytosis associated protein, active-site domain 37 302 IPR007135 GO:0019787
Gso12g0050 313 PANTHER UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3 1 308 IPR007135 GO:0019787
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso12g0050 Gso-Chr12 429666 434402 Dispersed/Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0050 K08343 - gmx:100787410 628.632