Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0045 ATGAACCCTGATCTTGAGCATGCTCCGCAAATTCCCTTGCTGAATCCTCCAACAGGGGAAAGTGGAAGGAGAACGCAAAAGGGTACCCTTGTTTTCATTGTCCTGATGTCATTGTTTGCACTTATCATCGTAAACCTTCAGAGCCATGAGCCCAGCTTAGAAAACAATATCACATTAATACCTAAAGCTAGAGGGGTTGCTGAGGGTGTATCAGCCAAGTCAAACCCATATCTGTCACACAAAGCTTCATATAACTGGACAAATGCAATGTTATCTTGGCAAAGAACAGCTTTCCATTTTCAACCTCAAAGGAACTGGATGAACGATCCTAACGGTCCATTGTTTTACATGGGGTGGTACCATGTATTTTACCAATACAATCCGGATTCAGCCGTGTGGGGCAACATAACATGGGGCCACGCTGTATCCAGAGACTTGATTCACTGGCTCTACCTTCCCATTGCCTTGTTTCCAGATAAGTGGTTTGACGTCAACGGTGTATGGTCAGGTTCAGCAACCCTTTTGCCAGATGGCAAAATCCTAATGCTCTACACGGGTAGCACCGATCAAAACGTGCAAGTCCAAAATCTTGCCTACCCCGCCAACCTATCTGATCCCCTCCTCCTTGATTGGGTCAAATATGCTGATAACCCTGTCTTGGCCCCTCCACCAGGCATTGGGCCAAAGGATTTTCGTGACCCAACCACTGCATGGTTTGGGCCAGATGAAAAGTGGAGGATCACCATTGGCTCAAAGCTCAACGGGACAGGTCTTTCATTGGTTTATAAAACCCAAGATTTCATCCACTACGAGCAAAATGATCACTATTTGCACCAAGTCCCGGGAACGGGTATGTGGGAGTGCGTGGACTTTTACCCGGTTTCAGTAAACGGGCCTAACGATGTGAAACATGTGTTGAAGGCTAGTTTGGATGACACCAAGGTGGATCATTATGCAATTGGGACATACTTCATTGAAAATGATACATGGGTGCCCGATAACCCGCATGAGGATGTGGGTATCGGGTTCAAATTGGACTATGGCAGATACTATGCGTCAAAGACATTCTATGACCAACACAAAAACAGAAGGATCCTGTGGGGTTGGATTAATGAATCAGATAGTGAAACCGCTGACTTGAAAAAGGGTTGGGCATCTCTCCAGACTATTCCAAGAACAGTAGTGTTTGACAAGAAGACTAGAACTAATTTGGTTCACTGGCCAGTGGAAGAAGTAGAAAGCTTAAGACTTGGCAGTTCCGAATTTGAAGGAGTTGTGGTTAAACCTGGCTCAGTTGTGCCACTGGACATAGGCCCAGCCACACAGTTGGACGTATTTGCTGAATTTGAAATCGAATTTTTAGCATCCAAAGGGAGTGGCAAGGACAATATAGGATGTGGAAATGGAGCTGTTGATAGAAGTGCTTTGGGACCATTCGGTATTCTGGCTATTGCAGATGACCATCTTTCTGAACTAACACCAATTTATTTCCATCTTTCTAGTACTACTAAAGATGGCAGTTCAACCACTTCCTTCTGTGTTGATGAAACTAGGTCATCAAAGGCTCCTGATGTTTCAAAGCTCGTTTTTGGAAGCAAAGTTCCTGTTCTCAGTGATGAAAAATTATCAATGAGGGTATTGGTGGACCATTCAATCATTGAGAGCTTTGCTCAGGGAGGGAGAACAGTGATCTCATCTAGAGTTTATCCAACAGAAGCAATATATGGAGCTGCAAGATTGTTTCTGTTCAACAACGCAACGGACATAAACATCAAGGCCTCGCTCAAGATTTGGCAATTGAACTCAGCTTTCATACGCCCCTTTCCCTTTGACCAGAAGTTGTGA 1845 0.4455 MNPDLEHAPQIPLLNPPTGESGRRTQKGTLVFIVLMSLFALIIVNLQSHEPSLENNITLIPKARGVAEGVSAKSNPYLSHKASYNWTNAMLSWQRTAFHFQPQRNWMNDPNGPLFYMGWYHVFYQYNPDSAVWGNITWGHAVSRDLIHWLYLPIALFPDKWFDVNGVWSGSATLLPDGKILMLYTGSTDQNVQVQNLAYPANLSDPLLLDWVKYADNPVLAPPPGIGPKDFRDPTTAWFGPDEKWRITIGSKLNGTGLSLVYKTQDFIHYEQNDHYLHQVPGTGMWECVDFYPVSVNGPNDVKHVLKASLDDTKVDHYAIGTYFIENDTWVPDNPHEDVGIGFKLDYGRYYASKTFYDQHKNRRILWGWINESDSETADLKKGWASLQTIPRTVVFDKKTRTNLVHWPVEEVESLRLGSSEFEGVVVKPGSVVPLDIGPATQLDVFAEFEIEFLASKGSGKDNIGCGNGAVDRSALGPFGILAIADDHLSELTPIYFHLSSTTKDGSSTTSFCVDETRSSKAPDVSKLVFGSKVPVLSDEKLSMRVLVDHSIIESFAQGGRTVISSRVYPTEAIYGAARLFLFNNATDINIKASLKIWQLNSAFIRPFPFDQKL* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0045 614 Pfam Glycosyl hydrolases family 32 C terminal 411 599 IPR013189 -
Gso12g0045 614 ProSitePatterns Glycosyl hydrolases family 32 active site. 99 112 IPR018053 GO:0004553|GO:0005975
Gso12g0045 614 Gene3D Glycosyl hydrolase domain; family 43 103 419 IPR023296 -
Gso12g0045 614 Gene3D - 420 600 - -
Gso12g0045 614 SMART glyco_32 99 560 IPR001362 GO:0004553|GO:0005975
Gso12g0045 614 SUPERFAMILY Concanavalin A-like lectins/glucanases 408 604 IPR013320 -
Gso12g0045 614 CDD GH32_Fruct1-like 105 394 - -
Gso12g0045 614 SUPERFAMILY Arabinanase/levansucrase/invertase 92 409 IPR023296 -
Gso12g0045 614 Pfam Glycosyl hydrolases family 32 N-terminal domain 99 408 IPR013148 -
Gso12g0045 614 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 49 608 - -
Gso12g0045 614 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 49 608 - -
Gso12g0045 614 MobiDBLite consensus disorder prediction 1 22 - -
Gso12g0045 614 Pfam Beta-fructofuranosidase, N-terminal domain 35 91 IPR021792 GO:0004564
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0045 Gso-Chr12 392404 397206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0045 10 608 Glycoside Hydrolase AT1G12240 58.360 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0045 K01193 - gmx:100810057 1270.37