Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0037 ATGTGGAGTCGCGCAAGAACCCTTTTCCTTCGCGTCCTGGAACCTCCTAATCACAACAACGCTTCGCTTTCCCAAACATTTACCCCTGGATTCTCCTTCCACACGCTCTCGCACTTCCAGGAAAAGGATGGCATTTGCCCCAAACCGCTTATAACTTTTGTTTTAGGAGGCCCTGGTAGTGGAAAAGGTACACAATGTGCAAAAATTGTTGAAACCTTTGGATTTAAGCATCTGAGTGCTGGAGATCTTTTGAGAAGGGAGATGGTTTCTGATAGTGAATATGGCTCAATGATTATGAATACAATTAGAGAAGGAAAAATTGTTCCATCAGGAGTGACTGTCAAATTGATTCTAAGAGAGATGAAATCTAGTGACAATCATAAGTTTCTTATTGATGGCTTCCCTAGAAGCCAGGAGAACCGTATAGCTTTTGAACAAATTATTGGAGCAGAACCAGATATGGTACTTTTTTTTGATTGTCCTGAAGAAGAAATGGTGAAACGTGTGCTGAGCCGTAATCAGGGTCGAATTGATGACAACATAGATACAATCAAGAACCGTCTTAAAGTATTTGAGTCATTAAATCTTCCTGTGATTGACTATTATGCTAAGAAAGGGAAACTTTACAGGATCAATGCAGTGGGAACAGTAGATGAAATATTTGAGCATGTTCGGCCAGTTTTTGAGGCATGTGAGCACGAGGCTAGATGA 711 0.4079 MWSRARTLFLRVLEPPNHNNASLSQTFTPGFSFHTLSHFQEKDGICPKPLITFVLGGPGSGKGTQCAKIVETFGFKHLSAGDLLRREMVSDSEYGSMIMNTIREGKIVPSGVTVKLILREMKSSDNHKFLIDGFPRSQENRIAFEQIIGAEPDMVLFFDCPEEEMVKRVLSRNQGRIDDNIDTIKNRLKVFESLNLPVIDYYAKKGKLYRINAVGTVDEIFEHVRPVFEACEHEAR* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0037 236 PANTHER NUCLEOTIDE KINASE 51 230 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso12g0037 236 Hamap UMP-CMP kinase [CMPK1]. 49 231 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Gso12g0037 236 Pfam Adenylate kinase 54 206 - -
Gso12g0037 236 TIGRFAM UMP_CMP_kin_fam: UMP-CMP kinase family 51 228 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Gso12g0037 236 ProSitePatterns Adenylate kinase signature. 129 140 IPR033690 -
Gso12g0037 236 Gene3D - 46 231 IPR027417 -
Gso12g0037 236 PRINTS Adenylate kinase signature 53 66 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso12g0037 236 PRINTS Adenylate kinase signature 81 95 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso12g0037 236 PRINTS Adenylate kinase signature 129 145 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso12g0037 236 PRINTS Adenylate kinase signature 176 191 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso12g0037 236 PRINTS Adenylate kinase signature 193 207 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso12g0037 236 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 228 IPR027417 -
Gso12g0037 236 PANTHER UMP-CMP KINASE 51 230 - -
Gso12g0037 236 CDD ADK 53 220 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gso12g0037 236 Hamap Adenylate kinase [adk]. 50 229 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0037 Gso-Chr12 330474 334132 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0037 K13800 - gmx:100806842 479.559