Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0029 ATGGATAGAACTGTTGATGCCGATATTGTGATCGTGGGAGGTGGTATTTGTGGCCTTGCAACAGCCCTTGCCCTTCACAGGAAGAGAATTAAAAGTCTGGTGTTAGAAAGATCAGAGAATTTGCGAGCCACAGGAGCAGCTATAATAGTGCAGGCAAATGGCTGGCGTGCACTTGATCAGCTTGGCATTGGCTCAACACTTAGACAAACTGCTATTCAAATAGAAGGGGGAAGATTTATATCTCTCAACGAGGCTGAGCCAATGGAATTTCCATTTGGGGTTAATCAGGAACTTCGTTGTTTAAAGCGTACTGATCTGGTGAAAGCCATGGCCGATAATTTACCGGTGGGGACTATACGTACGAACTGTCAAGTGGTTTCCATTGAATTAGATCCTTTAACACACTCTCCACAGCTTCTGCTTAGCAACGGAAGCATCCTTCAAGCTAAGGTTGTTATTGGATGTGATGGCGTGAATTCTGCCATTGCAAATATGTTTGGGTTACACCGAACGAAGCTCTTGCTTTTCTCTACATGTGTTGCACGAGGCTTCACAAATTTTCCAAATGGTCATCAATTTGCCAGTGAGTTTGTTGTGATGAGCAGAGGTCAAGTCCAACTCGGAAGAATCCCAGTGTCTGACCAGCTCGTTTATTGGTTTGTCACAAGGCCAAGGACTTCTAAAGATTCAACAATTTGGAAAGAGCCAGTTCTTATTAGGCAGTCATTAATAGAATCAATGAAAGGTTTCCCAGAAGGGGCTGTGGAGATGATACAAAACTGCAAGTTGAGCTTCTTGCATCTGACTGAGTTGAAGTATCGAGCACCGTGGGACTTGGTCTTGAACAAGTTCAGGAAAGGTACAGTGACAATTGCTGGTGACGCAATGCATGCCACAGGCCCATTCATTGCACAGGGTGGCTCAGCTTCCATAGAAGATGCCCTGGTTCTGGCTAGATGCCTGGCCCAAAAGAAATTTGCGGAAGGGATGAACATCGCAGACGCAGAAGAAGCATTTGATCAATATCTCAAAGAAAGGAAGATGAGAATCTTTTGGCTCTCTTTGCATTCTTTCCTTGTTGGGAAGAAGCTTGACACCAAATCATCCATAGTCAGATTCATTATCCTTGCAATCATGGCCATTCTGTTTAGAGACCCCGATTGGCATTCCCGCTATCATTGTGGACTTCTATAG 1194 0.4447 MDRTVDADIVIVGGGICGLATALALHRKRIKSLVLERSENLRATGAAIIVQANGWRALDQLGIGSTLRQTAIQIEGGRFISLNEAEPMEFPFGVNQELRCLKRTDLVKAMADNLPVGTIRTNCQVVSIELDPLTHSPQLLLSNGSILQAKVVIGCDGVNSAIANMFGLHRTKLLLFSTCVARGFTNFPNGHQFASEFVVMSRGQVQLGRIPVSDQLVYWFVTRPRTSKDSTIWKEPVLIRQSLIESMKGFPEGAVEMIQNCKLSFLHLTELKYRAPWDLVLNKFRKGTVTIAGDAMHATGPFIAQGGSASIEDALVLARCLAQKKFAEGMNIADAEEAFDQYLKERKMRIFWLSLHSFLVGKKLDTKSSIVRFIILAIMAILFRDPDWHSRYHCGLL* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0029 397 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 2 396 - -
Gso12g0029 397 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 2 396 IPR044560 -
Gso12g0029 397 SUPERFAMILY FAD/NAD(P)-binding domain 7 386 IPR036188 -
Gso12g0029 397 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 - -
Gso12g0029 397 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 - -
Gso12g0029 397 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 - -
Gso12g0029 397 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 - -
Gso12g0029 397 Pfam FAD binding domain 7 324 IPR002938 GO:0071949
Gso12g0029 397 Gene3D - 8 370 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0029 Gso-Chr12 279397 281911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0029 1 361 Miscellaneous Gene Families AT5G05320 36.193 4.26e-70 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0029 - - gmx:100805243 788.104