Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0017 ATGAATCTGATGCAGGCGGTTCGCTACGACGCCTACGGGGGAGGTCCTGCCGGCCTCAAGCACGTTGAAGTTGGCGTTCCCAGTCCAAAGGCAAATGAGGTTTTAATCAAACTGGAAGCAGTTAGCATTAACCCCATTGATTGGAAGATTCAGAAGGGTCTTCTCCGTCCTTTATTTCTCCCCAGAACCTTTCCCCACATACCTTGCACTGATGTGGCTGGAGAAATAGTTGAGATCGGAACTCAAGTCAAAGATTTCAAAGTTGGCGACCTAGTCCTTGCTAAACTCACTCATCAATATGGAGGTGGGTTCGCCGAGTTTGCTGTGGCTAGTGAGAGCTTAACAGCAGCCAGACCATCTGAGGTCTCAGCCGCTGAAGCTGCAGCATTGCCAATCGCCGGGCTTACAGCTCGTGATGCCCTCACTCAAATTGCAGGAGTCAAGCTTGATGGTACTGGCCAGCTCAAGAACATTTTAGTAACTGCTGCTTCAGGTGGTGTAGGTCACTATGCTGTTCAACTAGCAAAACTAGGCAACACCCATGTCACAGCCACTTGTGGGGCTCGCAACATTGACTTTGTTAAGGGCTTAGGTGCCGATGAGGTTCTTGACTACAGGACTCCAGAGGGGGCTGCACTGAAGAGTCCATCTGGTAGGAAATACGATGCAGTGATAAATTGTACAACTGGAATATCTTGGTCAACTTTTGATCCTAATTTGACTGAAAAAGCGGTGGTAGTTGATTTAACACCTAATGCAAGTTCATTGTGGACTGCTGCCATGAAGAAAATTACTTTTTCCAAGAAGCAGCTGGTGCCATTTTTTGTAAATGTCCAGCGTGAGGGCCTGGAATATCTACTTCAATTAGTGAAGGACGGGAAACTCAAGTCTGTTATTGACTCCAAGTTTCCTTTGAGCAAAGCTGAAGATGCTTGGGCTAAGAGCATTGATGGCCATGCTACCGGAAAAATCATTGTGGAGCCATAG 987 0.4721 MNLMQAVRYDAYGGGPAGLKHVEVGVPSPKANEVLIKLEAVSINPIDWKIQKGLLRPLFLPRTFPHIPCTDVAGEIVEIGTQVKDFKVGDLVLAKLTHQYGGGFAEFAVASESLTAARPSEVSAAEAAALPIAGLTARDALTQIAGVKLDGTGQLKNILVTAASGGVGHYAVQLAKLGNTHVTATCGARNIDFVKGLGADEVLDYRTPEGAALKSPSGRKYDAVINCTTGISWSTFDPNLTEKAVVVDLTPNASSLWTAAMKKITFSKKQLVPFFVNVQREGLEYLLQLVKDGKLKSVIDSKFPLSKAEDAWAKSIDGHATGKIIVEP* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0017 328 CDD MDR1 7 326 - -
Gso12g0017 328 Pfam Zinc-binding dehydrogenase 197 326 - -
Gso12g0017 328 Gene3D - 11 326 - -
Gso12g0017 328 PANTHER ZINC-BINDING DEHYDROGENASE FAMILY OXIDOREDUCTASE 1 328 - -
Gso12g0017 328 SUPERFAMILY GroES-like 4 147 IPR011032 -
Gso12g0017 328 SMART PKS_ER_names_mod 14 326 IPR020843 GO:0016491
Gso12g0017 328 Gene3D - 141 279 - -
Gso12g0017 328 PANTHER ZINC-TYPE ALCOHOL DEHYDROGENASE-LIKE PROTEIN C16A3.02C 1 328 - -
Gso12g0017 328 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 281 IPR036291 -
Gso12g0017 328 Pfam Alcohol dehydrogenase GroES-like domain 32 97 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0017 Gso-Chr12 158453 160931 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0017 K00224 - gmx:100790762 617.076