Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0014 ATGGCCGAGGAACCCCAAAAACCAGCCTCCGCTGAAGAAGTGGTCGGTGTTCCTGCGGAGAACCCACCATCTGAAGCCGAAGCTGAAAACATCGAAGCAGAGAAGGCCCAGAGTGGTGTAGAAGACAAGATTTCCCAGTCGGTTTCGTTCAAGGAGGAGACCAACGTGGTTGGCGACCTCCCCGAGGCGCAGAAGAAAGCCCTTGATGAGCTCAAGAAGCTTGTTCAAGAAGCGCTCAACAACCATGAGCTAACTGCTCCCAAGCCAGAACCGGAGAAGAAGAAACCAGCAGCAGAGAAGAAGGAGGAAGTTGAAGTGACAGAAGGGAAGAAGGAAGCTGAAGTCATAGAAGAGAAGAAGGAAGTGGAAGTGACGGAAGAGAAGAAGGAAATTGAAGTAACAGAAGAGAAGAAGGAAGCTGAAGTCATAGAAGAGAAGAAGGAAGTGGAAGTGACGGAAGAGAAGAAGGAAATTGAAGTAACAGAAGAGAAGAAGGAAGCAGAAGTGAAAGAAGAGAAGAAGGAAGGGGAAGTGACGGAAGAGAAGAAGGAAGTTGAAGTGACGGAAGAGAAGAAGGAAGCGGAAGTGATAGTAGAAGAGAAGAAGGAAGTTGAAGTGACGGAAGAGAAGAAGGAAGTGGAAGTGACCGAAGGAAAGAAAGAAGTGGAAGTGATCGAAGAGAAGAAGGAAACAGAAGTGACAGAAGAAAAGAAAGAAGTGGAAGTAGAAGTGAGGGAAGAGAAGAAGGAAAGTGAAGTGAAAGAAGAAGAAAAAGGTCGGGAGGTTGTTCCAGAGGAAGTTGAGATATGGGGAATTCCCCTGCTGGGGGACGAGAGGAGCGATGTGATTCTGCTAAAGTTTCTTAGGGCAAGGGATTTCAAGGTGAAGGAGGCCTTGAACATGATAAGAAACACGGTGCGATGGAGAAAGGAATTTGGAATAGAGGGTCTAGTGGAGGAAGATCTTGGAAGTGATTGGGAGAAGGTGGTGTTCAAGGATGGATACGACAAAGAAGGGCACCCGGTGTACTACAACGTCTTTGGGGAGTTTGAGGACAAGGAGTTGTACAGCAAGACGTTTTTGGACGAGGAAAAGAGGAACAAGTTCATAAGGTGGAGGATTCAGTCGTTGGAGAAGAGCGTTAGAAGCCTTGACTTCTCTCCGAATGGGATATCGACAATAGTTCAGGTGAACGACCTTAAGAACTCTCCCGGACTGGGCAAGAGGGAACTGAGGCAGGCCACCAATCAGGCCCTTCAACTGCTTCAGGACAACTACCCTGAGTTCGTTGCCAAGCAGATATTCATCAATGTCCCCTGGTGGTACCTTGCCTTTTCTAGGATGATCAGTCCCTTCTTCACACAGAGGACCAAGAGTAAATTTGTTTTTGCTGGCCCTTCCAAATCTGCTGATACCCTTTTCAGATATATAGCTCCGGAGCTGGTCCCGGTTCAATACGGTGGTCTTAGCAGAGAGGCTGAACAGGAATTCACCTCTGCTTACCCTGTTACGGAGTTTACTATTAAACCCGCTACCAAACATTCTGTTGAGTTCCCTGTTTCTGAGAAAAGCCATCTTGTTTGGGAAATCCGAGTGGTGGGTTGGGATGTCAGCTATGGAGCTGAATTTGTGCCCAGCGCTGAGGATGGATACACTGTCATAGTACACAAGAGCAGGAAAATTGCTCCCGCCGATGAGACCGTTCTTACCAACGGTTTCAAAATTGGTGAACCTGGCAAGATTGTACTCACCATAGACAACCAAACATCCAAGAAGAAGAAACTCCTCTACAGGTCCAAGACCAAACCCATTGCAGAGTAA 1821 0.4739 MAEEPQKPASAEEVVGVPAENPPSEAEAENIEAEKAQSGVEDKISQSVSFKEETNVVGDLPEAQKKALDELKKLVQEALNNHELTAPKPEPEKKKPAAEKKEEVEVTEGKKEAEVIEEKKEVEVTEEKKEIEVTEEKKEAEVIEEKKEVEVTEEKKEIEVTEEKKEAEVKEEKKEGEVTEEKKEVEVTEEKKEAEVIVEEKKEVEVTEEKKEVEVTEGKKEVEVIEEKKETEVTEEKKEVEVEVREEKKESEVKEEEKGREVVPEEVEIWGIPLLGDERSDVILLKFLRARDFKVKEALNMIRNTVRWRKEFGIEGLVEEDLGSDWEKVVFKDGYDKEGHPVYYNVFGEFEDKELYSKTFLDEEKRNKFIRWRIQSLEKSVRSLDFSPNGISTIVQVNDLKNSPGLGKRELRQATNQALQLLQDNYPEFVAKQIFINVPWWYLAFSRMISPFFTQRTKSKFVFAGPSKSADTLFRYIAPELVPVQYGGLSREAEQEFTSAYPVTEFTIKPATKHSVEFPVSEKSHLVWEIRVVGWDVSYGAEFVPSAEDGYTVIVHKSRKIAPADETVLTNGFKIGEPGKIVLTIDNQTSKKKKLLYRSKTKPIAE* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0014 606 Coils Coil 117 191 - -
Gso12g0014 606 PANTHER PATELLIN-1 134 606 IPR044834 GO:0008289
Gso12g0014 606 PANTHER PATELLIN-1 11 150 IPR044834 GO:0008289
Gso12g0014 606 MobiDBLite consensus disorder prediction 78 186 - -
Gso12g0014 606 CDD SEC14 325 489 IPR001251 -
Gso12g0014 606 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 505 598 IPR036598 -
Gso12g0014 606 Gene3D - 204 520 IPR036865 -
Gso12g0014 606 Coils Coil 230 257 - -
Gso12g0014 606 SUPERFAMILY CRAL/TRIO N-terminal domain 46 321 IPR036273 -
Gso12g0014 606 SUPERFAMILY CRAL/TRIO domain 333 491 IPR036865 -
Gso12g0014 606 Pfam CRAL/TRIO domain 328 488 IPR001251 -
Gso12g0014 606 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 319 494 IPR001251 -
Gso12g0014 606 PANTHER PATELLIN-LIKE PROTEIN 11 150 - -
Gso12g0014 606 PANTHER PATELLIN-LIKE PROTEIN 134 606 - -
Gso12g0014 606 SMART sec14_4 324 491 IPR001251 -
Gso12g0014 606 ProSiteProfiles GOLD domain profile. 494 601 IPR009038 -
Gso12g0014 606 MobiDBLite consensus disorder prediction 86 186 - -
Gso12g0014 606 SMART CRAL_TRIO_N_2 280 305 IPR011074 -
Gso12g0014 606 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0014 Gso-Chr12 142782 145320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0014 284 468 Acyl Lipid Metabolism Gene Families AT5G47730 29.000 5.86e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0014 - K19996 gmx:100794623 699.893