Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0013 ATGGAATTGAATCCTAAAAACAGCAACGAGCAAACAAAAGAAGCAATGATGATGAATGTCATAGGGCTGAGTCTGAGTCTGGTGTTAACTTCACTGGCAGCAGCGAGCACCATCGTCAAAGAAGGGCACAGAGTTGTCGTGGTTGAATACGACCAAGGTGGCCATCAGAACACCAAAATCTCAATATCACCAGAACAACCTACGCATGCTAATCCTAAAGATCCCATTTGCGACGCCTATGGAAAATGCAAGCACAAAATCGTGGATGCAATGGAGAAGTCTCAAGAGGTCATCCATGAGAAGAAGGACGAGATTGCCGCCAACAAGGAGGCAGCACGCCAAGTTGCTGGTAAAACCAAAGAGAGAGTGTATGATAAAGCCCGTCATGTCCACGAATACGCCCAAAACACTGTAGAAACAGCCAAGAACCATATTGCCTGTAACGTGTCAAACGCCAAAGATGCATTCAAGCGTCTAATAGCAGGATCTTTGGAGAGGCAGAGCCTTAATTCTTTGATGGGGGTGGCTAACATGTTGGGGTTTTCCACGGCTTATGGGATGTGTGTGTGGGTTACGTTCATCTCCAGCTATGTGCAGTCCAGGGCTATGGCAAGGCAACAATTTGCAGTGGTGCAGAGTAAAATATATCCTGTTTATTTCAGGGCCATGTCTTATAGCATCGGGGTCGCTTTATTCGCCCATGTCTTGGCCCATAGAAACACCTTGCTCTCCAACAAGTCTGACTTATTGCAAGCATATAATCTTCTGGCCTCCCTTGTCACACTTTTCTTCAATTCTCTTTACTTGGAGCCTCGGGCCACCAAGTTGATGTTCGAGAGGATAAAGATAGAAAAAGAGGAAGGAAGAGGCAGATCAGAAGATGTGAGTAGCAGAACTAAAGAGCCAGCTTCCACGACCGCAGACCAGGATGCAGTCAGAACAAGGATTATCAAGCTCAATGACAAGCTCAAGAAACTCAATTCCTACTCCTCATTCCTCAATATCCTCAATCTCATGTCTCTTACTTGGCATCTCGTTTATTTGGCTCAACGACTTCCCCATATTTGCTAA 1071 0.4556 MELNPKNSNEQTKEAMMMNVIGLSLSLVLTSLAAASTIVKEGHRVVVVEYDQGGHQNTKISISPEQPTHANPKDPICDAYGKCKHKIVDAMEKSQEVIHEKKDEIAANKEAARQVAGKTKERVYDKARHVHEYAQNTVETAKNHIACNVSNAKDAFKRLIAGSLERQSLNSLMGVANMLGFSTAYGMCVWVTFISSYVQSRAMARQQFAVVQSKIYPVYFRAMSYSIGVALFAHVLAHRNTLLSNKSDLLQAYNLLASLVTLFFNSLYLEPRATKLMFERIKIEKEEGRGRSEDVSSRTKEPASTTADQDAVRTRIIKLNDKLKKLNSYSSFLNILNLMSLTWHLVYLAQRLPHIC* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0013 356 Gene3D Helix hairpin bin 74 168 - -
Gso12g0013 356 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN 70 156 - -
Gso12g0013 356 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN 108 354 - -
Gso12g0013 356 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEIN 17 67 - -
Gso12g0013 356 PANTHER - 108 354 - -
Gso12g0013 356 PANTHER - 17 67 - -
Gso12g0013 356 PANTHER - 70 156 - -
Gso12g0013 356 Pfam Domain of unknown function (DUF4149) 180 280 IPR025423 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0013 Gso-Chr12 128502 129936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0013 - - gsj:114379171 686.026