Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0009 ATGATGAAATCCGGGAATAGGAATATGGAATCAACCGCAAAAGTTCACCCTTCCAATGATCCTGAACTCGATCCCGACTCTTACGCCCTCGAGAAGTTCAGACTATACGAAACCAGAGCGAGGTTTTACCTGATCGGTAGTGATCGGAACAAGAGGTTCTTCCGGGTGTTGAAAATCGATCGGTCAGAGGCGTCTGATCTGAATATCAGCCAAGACCCCGTGCTGTATTCTCCCCAGGAAATCAAGAGCTTGCTTCAGCGGATTGCTGAAGGTAACAGGGCCACTGGCGGCCTCACTTTTGTCGCTAAGGTTTTCGGGATTGCCGGCTGCATCAAGTTTCTCGAGTCCTACTATTTGATTCTCGTTACCAAGCGCAGACAAATTGGTTCTATTTGTGGCCATGCAATCTATAGCATCAAGGAGAGCCAATTGATAGCGATTCCGCATGTTTCAATTCAATCTGATTTAGCCCACTCTAAGACTGAGCTCAGGTACAAAAAGCTTTTGTCTAGTGTCGATTTGACCAACGATTTTTTCTTTAGTTACACTTACCCTATAATGCAAAGTTTGCAAAAGAACGTCTCCTCCAGCTCCAGTCAAGAGGGAGGGATGCCATATGATAATATATTTGTTTGGAATGCCTATTTGACACAAGCAATCAGATCAAGATGCAATAACACCATTTGGACCATAGCTTTAGTTCATGGTCATTTTAGGCAGATTCGTCTATCAATTTTTGGGAGGGACTTCAGTGTTTCCTTGATTTCTAGACGATCAAGACATTTTGCAGGGACGCGGTACTTGAAAAGGGGTGTGAATGATCGGGGGAGGGTTGCTAATGATGTTGAGACAGAGCAGATTGTCCTTGATGAAGAATCAGGCTCTTGCAAGGGAAAGATGAGTTCAGTTGTGCAAATGCGTGGATCAATACCACTTTTCTGGTCACAAGAAGCATCAAGATTTAGCCCCAAGCCTGATATAATTTTGCAGAGGTATGATCCAACATACCAAGCAACAAAATTGCATTTTGAAGACCTAGCTAAGAGATATGGCAATCCAATTATTGTTCTGAATTTGATTAAGACAGTTGAGAAGCGGCCTCGAGAAATGATGTTGAGGCGTGAATTTGCAAATGCTGTTGGGTATCTGAACCAAATTCTACCAGTGGAGAACCATCTTAGATTTATTCACTGGGATTTTCACAAGTTTGCAAAGAGCAAGTCTGCCAATGTTTTGGCAGTTTTAGGAGCTGTAGCAAGTGAAGCGCTTGATTTAACTGGTTTTTACTACAGTGGTAAACCCAGCATCATTAAGAGAGCCAACAAGAGCAATCAAACAAGCACAGGGAGGGATACTTCACTGAGAGATCTGAGAGCTAGTTCTGTGGATCTTGTGAGGATTGGGAACAGTAATGAAATGCTAAATTCTGTGGTTAATCAAGACAAAGAGACTGACATGAACCATAAGAATAAAAAAGATAATTTTGGTAGTGATGCACCACATTTTCAGAGTGGAGTTCTCCGTACTAACTGCATTGACTGCTTGGACCGTACAAATGTTGCCCAGTATGCATATGGTCTTCAAGCTTTAGGACGCCAGCTCCATGCAATGGGTTTGACTGATGTTCCAAAAGTGGATCCTGATAGTAGTATTGCTGCAGCTCTAATGGATATGTATCAAAGTATGGGAGATGCTCTTGCCCAGCAATACGGTGGCTCTGCTGCTCACAATACTGTGTTTCCAGAGAGGCAGGGAAAGTGGAAAGCAACAACACAATCAAGAGAATTTTTAAAATCCATAAAACGATACTATAGCAATGCTTACACAGATGGTGAAAAACAAGATGCAATAAACTTGTTTTTAGGTTACTTCCAACCACAGGAAGGGAAACCTGCGCTCTGGGAGCTGGATTCAGATTATTATCTCCATGTATCTGGGATTGGGGATGATCTAATTCCTGAGAAGTGTTCTGAACCAAATCTCAGTTCTTCTGGAAGAGGTGGAATGATATTCACGCCTATACCAGCTTGCAGAGAAGACTTCTCTCGCATAAAGTTGACATCATTTGACAAGTTAATTGAAAAGACCTGTAGTACAATTAAAAATGTAAGACTATGCCGTGAGCCGGATCAGAGACCAGGTGGGGTTTCTGGAAACAGTGGTGTAGCACCTGATGCAGCTGAGATACAGCTCAAAAGCCCAAATTGGCTTTTCGGCCAGAGAAAGTATGAAGAGGGTTCCTCTGCTGCAAAAGTTGCTTCTTGTGAATCTGACGTTGAAGGATCTCATGCTAATGGCTTTTGTGACTTGAATTGGCTTTCCTCTGGCAATGCTATGAATGAAGAAGATGTTTTCCAAAGGTACCTTACAATGACCTCAGCAAATGAGGCCAACGGTTGGTATGGAGGTAGTCTCCTTGGTGATCAAGATGAAAACAGTGAGATATATGAACATTATGCAGAGTTATGTCAGGGACCTGCCTTGGAACTTTTCCAAAATGACCCTGATAGGGAGCAACACTATGCAGATGCTTTAAGCACGAGTTCATATGAAATTGTTAATGATGCTGCCGTTGCAGCAGAAATGGAAGCAACTCTAAAGGAGTATGACCAAGTTGGTGCTGACCTTGGGATCATTCCCAAATCTTGTAAATTCTTTGCTGATGATCCGAGCTGGCTGACGAGATGGTTAACTGGGGACGAAAAAGTACCAAGGATATGA 2721 0.4274 MMKSGNRNMESTAKVHPSNDPELDPDSYALEKFRLYETRARFYLIGSDRNKRFFRVLKIDRSEASDLNISQDPVLYSPQEIKSLLQRIAEGNRATGGLTFVAKVFGIAGCIKFLESYYLILVTKRRQIGSICGHAIYSIKESQLIAIPHVSIQSDLAHSKTELRYKKLLSSVDLTNDFFFSYTYPIMQSLQKNVSSSSSQEGGMPYDNIFVWNAYLTQAIRSRCNNTIWTIALVHGHFRQIRLSIFGRDFSVSLISRRSRHFAGTRYLKRGVNDRGRVANDVETEQIVLDEESGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKPDIILQRYDPTYQATKLHFEDLAKRYGNPIIVLNLIKTVEKRPREMMLRREFANAVGYLNQILPVENHLRFIHWDFHKFAKSKSANVLAVLGAVASEALDLTGFYYSGKPSIIKRANKSNQTSTGRDTSLRDLRASSVDLVRIGNSNEMLNSVVNQDKETDMNHKNKKDNFGSDAPHFQSGVLRTNCIDCLDRTNVAQYAYGLQALGRQLHAMGLTDVPKVDPDSSIAAALMDMYQSMGDALAQQYGGSAAHNTVFPERQGKWKATTQSREFLKSIKRYYSNAYTDGEKQDAINLFLGYFQPQEGKPALWELDSDYYLHVSGIGDDLIPEKCSEPNLSSSGRGGMIFTPIPACREDFSRIKLTSFDKLIEKTCSTIKNVRLCREPDQRPGGVSGNSGVAPDAAEIQLKSPNWLFGQRKYEEGSSAAKVASCESDVEGSHANGFCDLNWLSSGNAMNEEDVFQRYLTMTSANEANGWYGGSLLGDQDENSEIYEHYAELCQGPALELFQNDPDREQHYADALSTSSYEIVNDAAVAAEMEATLKEYDQVGADLGIIPKSCKFFADDPSWLTRWLTGDEKVPRI* 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0009 906 ProSiteProfiles Sac phosphatase domain profile. 169 572 IPR002013 GO:0016791
Gso12g0009 906 MobiDBLite consensus disorder prediction 1 15 - -
Gso12g0009 906 MobiDBLite consensus disorder prediction 1 23 - -
Gso12g0009 906 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 29 841 IPR043573 GO:0043813|GO:0046856
Gso12g0009 906 Pfam SacI homology domain 105 403 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0009 Gso-Chr12 87157 100020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso12g0009 14 906 Acyl Lipid Metabolism Gene Families AT1G22620 75.585 0.0 1431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0009 K22913 - gmx:100800092 1806.96