Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso12g0004 ATGGGTGGAAGTTCTATTGGTGATGACTGGGAGCTCACTTCCTCATCTAACGAGGGTCGGACAGTGGTCTTAGTTGGACGAACTGGCAATGGCAAGAGTGCAACAGGTAATACCATTCTTGGAAGGAAGGTCTTCAAGTCAAGGGCTAGCTCCTCTGCTGTATCCACCTCATGTGAATTGCAGACAACAGAATTAAACGACGGACAAATTGTTAATGTTATTGACACCCCAGGATTATTTGATTTGTCTGTCGGATCTGAGTTTGTTGGTAAGGAAATTGTCAAATGCATTGATTTGGCCAAGGATGGGATCCATGCTGTCATTGTAGTGTTCTCGGTTAGAACACGCTTTACTGAGGAAGAAGAAACTGCTCTTCGGAGCTTGCAGACATTATTTGGAAGCAAAATTGTTGATTACATGATTGTGGTCTTCACTGGAGGAGATGAATTGGAAGAAAATGCTGAGACACTTGAGGATTATTTAGGCCGTGAATGTCCAGAGCCTTTAAAGGAAATTCTTGTTTTGTGTGACAATCGTTGCGTACTTTTTGATAACAAGACTAAGGATGAAGGGAAGCGCTTTGGACAAGTTCAACAACTTCTCTCTTTTGTAAACACAGTTCTATCACGTAATGGTGGACGACCTTATACAGATGAGTTATTTACACAACTGAAGAAGGGAGCAATGGAGCTGCATAACCAACAAAGAGAGGTTGATTCTTTAAAAGGATATTCAAAAGGAGAGATATTGAAGTTTAAAAAGCAAATGCAGCAAACATATGATGACCAATTAAAGCGAATTACTGAGATGGTTGAATCAAAGTTGAGGGAGGCAACTATGAGGCTTGAGCAACAATTGGCAGAAGAGCAAGCTGCAAGACTTAAGGCAGAGGAGAATGCAATGTTAGCTCAAATGAGATCAGATGATGAAATACGAAAACTCAGAGAACATCTTGAGAAGGCACATGAAGAACTTCGCAAGCGAGGTGAAGGTCGTTGTGCCATTCTTTGA 1011 0.4135 MGGSSIGDDWELTSSSNEGRTVVLVGRTGNGKSATGNTILGRKVFKSRASSSAVSTSCELQTTELNDGQIVNVIDTPGLFDLSVGSEFVGKEIVKCIDLAKDGIHAVIVVFSVRTRFTEEEETALRSLQTLFGSKIVDYMIVVFTGGDELEENAETLEDYLGRECPEPLKEILVLCDNRCVLFDNKTKDEGKRFGQVQQLLSFVNTVLSRNGGRPYTDELFTQLKKGAMELHNQQREVDSLKGYSKGEILKFKKQMQQTYDDQLKRITEMVESKLREATMRLEQQLAEEQAARLKAEENAMLAQMRSDDEIRKLREHLEKAHEELRKRGEGRCAIL* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso12g0004 336 PANTHER BNAC06G07830D PROTEIN 2 326 - -
Gso12g0004 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 189 IPR027417 -
Gso12g0004 336 CDD AIG1 20 226 - -
Gso12g0004 336 Gene3D - 20 235 IPR027417 -
Gso12g0004 336 Coils Coil 272 328 - -
Gso12g0004 336 ProSiteProfiles AIG1-type G domain profile. 17 225 IPR006703 GO:0005525
Gso12g0004 336 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 2 326 IPR045058 -
Gso12g0004 336 Pfam AIG1 family 20 234 IPR006703 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso12g0004 Gso-Chr12 51198 56505 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso12g0004 - - gmx:100807910 642.114