Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3680 ATGGAGGAAAGCATCAATAGAGGGGAATATCAACCTAATTTGGCTAAACAGTCTTCTTTGAGATTAGGTGGCAGTTTTAAATCAACATTGTCTGGAAGATCAAATCCTCGAAATTCCCCTTCATTCCGGCGGCTTAATTCTGTGCGAACGCCAAGAAAAGAAGGAAGGATCAGCGTAGGCGGTGCACTGTGGTTTCGGAGCAATCATTTACTTTTGTGGTTGCTTCTAATCACCCTCTGGGCTTATCTTGGATTTTTTGTTCAGTCCAGGTGGGCTCATAGTGATAAGAAGGAAGAATTTTCTGGCTTTGGAACCGGGCCAAGAAATACCAACACAGATGCTGAACAGATTCAGCGACGTGATTTGCTTGCTAGCGATAAATCATTATCTGCTAATAATGAGACTGGTGCAGATATAGCAGGGATCAGTAAAACTATAAGTGTAGCTTTGGCAAAGAAAGACAATGATGTTCCATCTCATCGTAAAACAAGCTCAAAGAAGAGGAGCAAGAGCAGACGTTCTTCGAAAGGTAAATCACGTGGTAAGCTGAAACCAACTACAGAAATTAAGAACACTGATATAGAGGAGCAGGAGCCAGAAATTCCTACAACCAATAATACGTATGGATTGCTTGTTGGTCCGTTTGGCCCAATGGAGGATAGGATTCTGGAATGGAGTCCTGAGAAACGTTCTGGCACATGTAACAGGAAGGAGGACTTTGCACGTCTGGTTTGGTCCAGAAGATTTATCTTGATATTCCACGAGCTTTCCATGACTGGAGCTCCACTTTCAATGATGGAGTTGGCAACTGAACTTTTGAGCTGTGGGGCCACTGTTTCAGCTGTTGTGCTTAGCAGGAAAGGTGGTTTAATGTCAGAGCTTGCTAGGAGACGGATCAAGGTGCTTGAGGACAAATCAGATCTCAGCTTCAAAACTGCAATGAAGGCTGATCTTGTAATTGCTGGTTCAGCTGTCTGTGCATCATGGATTGAACAATATATTGATCATTTCCCAGCTGGTGCAAGCCAAGTTGCCTGGTGGATTATGGAAAATCGACGAGAGTACTTTGATCGTTCAAAGGATATATTGCACAGAGTAAAGATGTTGGTTTTTCTTTCTGAATCACAATCTAAACAGTGGCAAAAATGGTGTGAAGAGGAAAGCATAAAACTGAGATCCCTCCCTGAAATTGTTGCATTGTCTGTTAATGAAGAACTGGCATTTGTAGCTGGTATTCCTTCAACACTTAACACTCCATCCTTTAGTACCGAGAAAATGGTTGAGAAAAAGCAGTTATTGAGGGAATCAGTCCGAAAAGAAATGGGCCTAACTGATAATGACATGCTTGTGATATCTCTAAGCAGCATCAACCCTGGGAAGGGCCAGCTATTGCTTCTTGAATCAGTAAGCTCAGTACTTGAACAAGGACAGTTGCAAGATGATAAGAAAATGAAAAAAGTGTCAAATATAAAGGAAGGCCTATCTTCCCTGACTAGAAAGCATCGTATTAGAAAATTGTTGCCATTGATGAAGAATGGGAAAGTAGCTTCAAATAGTATCTCAAGCAATTCTTTAAGCAGAAGGAAACAAGTGTTGCCTAATGGCAAAGGAACAATTCAACAATCTCTCAAACTTCTCATTGGTTCTGTTAGATCAAAGAGTAACAAGGCAGATTATGTTAAAAGCCTTCTAAGTTTCTTAGAACAACATCCAAACGCCTCGACATCAATTTTTTGGACTCCAGCCACAACTCGAGTTGCCTCACTTTACTCTGCTGCAGATGTTTACGTTATAAACTCTCAGGGGCTGGGAGAAACATTTGGACGTGTGACTATAGAAGCAATGGCATATGGTCTTCCGGTTCTTGGAACGGATGCTGGAGGAACACGGGAGATTGTTGAGAACAATGTTACTGGTCTTCTTCATCCTGTTGGACATCCGGGGAATGATGTTCTTGCACAGAATCTCCGGTTTTTACTCAAAAACCAGTTGGCAAGGAAGCAAATGGGGGTGGAAGGAAGAAAGAAGGTGCAGAAGATGTATTTGAAGCAACACATGTATAAGAATTTTGTAGAGGTTATTACTAGGTGCATGAGAAGCAAATAA 2106 0.4169 MEESINRGEYQPNLAKQSSLRLGGSFKSTLSGRSNPRNSPSFRRLNSVRTPRKEGRISVGGALWFRSNHLLLWLLLITLWAYLGFFVQSRWAHSDKKEEFSGFGTGPRNTNTDAEQIQRRDLLASDKSLSANNETGADIAGISKTISVALAKKDNDVPSHRKTSSKKRSKSRRSSKGKSRGKLKPTTEIKNTDIEEQEPEIPTTNNTYGLLVGPFGPMEDRILEWSPEKRSGTCNRKEDFARLVWSRRFILIFHELSMTGAPLSMMELATELLSCGATVSAVVLSRKGGLMSELARRRIKVLEDKSDLSFKTAMKADLVIAGSAVCASWIEQYIDHFPAGASQVAWWIMENRREYFDRSKDILHRVKMLVFLSESQSKQWQKWCEEESIKLRSLPEIVALSVNEELAFVAGIPSTLNTPSFSTEKMVEKKQLLRESVRKEMGLTDNDMLVISLSSINPGKGQLLLLESVSSVLEQGQLQDDKKMKKVSNIKEGLSSLTRKHRIRKLLPLMKNGKVASNSISSNSLSRRKQVLPNGKGTIQQSLKLLIGSVRSKSNKADYVKSLLSFLEQHPNASTSIFWTPATTRVASLYSAADVYVINSQGLGETFGRVTIEAMAYGLPVLGTDAGGTREIVENNVTGLLHPVGHPGNDVLAQNLRFLLKNQLARKQMGVEGRKKVQKMYLKQHMYKNFVEVITRCMRSK* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3680 701 MobiDBLite consensus disorder prediction 27 50 - -
Gso11g3680 701 Pfam Glycosyl transferases group 1 565 675 IPR001296 GO:0016757
Gso11g3680 701 PANTHER BNAA05G14870D PROTEIN 1 701 - -
Gso11g3680 701 MobiDBLite consensus disorder prediction 181 197 - -
Gso11g3680 701 MobiDBLite consensus disorder prediction 153 209 - -
Gso11g3680 701 MobiDBLite consensus disorder prediction 27 46 - -
Gso11g3680 701 CDD GT4_PimA-like 250 694 - -
Gso11g3680 701 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 255 698 - -
Gso11g3680 701 MobiDBLite consensus disorder prediction 163 180 - -
Gso11g3680 701 Gene3D Glycogen Phosphorylase B; 421 681 - -
Gso11g3680 701 Pfam Glycosyl-transferase family 4 245 414 IPR041693 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3680 Gso-Chr11 52435100 52439753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g3680 18 699 Glycosyltransferase AT3G15940 62.663 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3680 - - gmx:100795000 1315.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0124 15 1090890 1095448 Gso11g3680 11 52435100 52439753 GST
Gso11g3680 11 52435100 52439753 Gso8g1725 8 16834089 16837904 PCT
Gso8g1725 8 16834089 16837904 Gso11g3680 11 52435100 52439753 PCT