Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3679 ATGGCTACGACGACTGAAGAAGGGGTCGAGTACGAGAGTGATCCCGAAGAGGCCACGAGATCGCTCGCAATGCGGAGAAGGCGTGAGGCAAGTGATGACGAAGAAGGTGACGCCGACGCTGACGGAAGAGACTCCGCCACCGCCGATCGCCGGATAACTCATTCCGATGACTCCGACGGCGAGGGCGGCGTGGCAGATTATGATGACGAAGAAGAGTTGGAAGAGGAAGAGGAGGAGGAAGAAGAAGAGGAAGGAGAAGAGAGGGTTGGACTTGAACATGAACATGAACATGAAGGAGGTGCTAATGGCACAGTGGTTAAAGATTCCGATGATGCTGATGTGAAAGCCCCTTTGGAGGAATCAGGGAATGGAAATGAAGAAGAGAAGAAAGAGAATGAACCATTTGCGGTGCCCACTGCTGGAGCCTTTTATATGCACGATGATAGGTTCAGGGACAATGCCGGTGCACGCCACAGGCGTATGCGTGGTGGAAGGAGACTGTGGGAGTCCAAGGATGATAGGAAGTGGGGACATGATAAGTTTGAGGAAATTACTTTGCAGGAAAGGCACTATAAAGAGGGAAGGAGACCTTCTAAGGGTAATTTTCGAGGCCGTGGTGGTAAAACACGAGGTGTTGACCACAGTGGAAGATATGTTAGAGGTAGCCGGAAAGGGTATGATAACAGAGGCAATCAAACTCAAGCACCAAAGAGTGTTGTGCGAGGGAGAGGACCCCAGAGGTATGAGCCTACTAATAAGAACAATGATTCAGCATCCCAGGTGCAAAATAAACAACCTGGGAAGCAGCCAGAGAAAGCATCACATGCTAGTTTGGGAAAAACTTTTGCTCCTGTCTCTAATTCGAAGTCTGATCCTGTGCCTGCTAAGAAACAAGTGTTTGCATCAAATTTGAATTATGCATCCCCCCCCTTTTACCCTTCGAGTTCTTCCAACAAAGATATAAGTGTGGCACCAAAAGGGGATGTCCAAACGGGTGGTACAGGCAGGATTGTTCGCCCTGGTGTTGTGGATGAGGGTTTTTTGGTTCAACAGAACAATGTACTTCTTCGAGGAAAGAATGTTGTTGATCATGTCAGCATGGAGAAGCTATATATTGATGGGCCTGGCACTCCATCTGTTGGAAAGGCTTTTAACAATATGCATATTCCACTACCTGGATCTTCTGGAGTTAATCCTTCTCAGTCTGCTCATCCAAGAGGTCACGGGAGGAGTGGAGCAGTACCAGTGCAGATGAATTATCCGCCTGTTACCTCTCATAATCAACCAAGTAAAATTGATCCAACACAACTCCCGGCTATTCAAAGAACTGCTCCAGGGCGAACTTCACCTTCTTTGCAAGCCCCTGCTCCACAGGTTGGTAATCGACCTGGTAGTGGGTCTCAAGCTTCATCTCCCCCCAAAACATCCAGCGCGATTAGTTCATTGGATTCTGGAGAAATTGATGCAGCTTCAGATTCCGATAAATTGAAGGGTGCATTGGTTGGGAAGGGAAGGGGAGCTCCACAGGGTAGTGGAAGGGGCTCTTTTGTTTATGGTGGAGCTATGGGGACTGCTGGAAATATCAGTGGTACTCATGGAGATCATAACTTCCCAACCTTCTTGCCCGTTATGCAATTTGGAGGGCAACATCCCGGTGGCATAGGAGTTCCTGCTGTTGGCATGGCATTTCCTGGATATGTTGGTCAGCCTCAACTTGGTTTGGGAAACTCTGAAATGACCTGGCTACCAGTTTTGACTGGGGCAGCGGGTGCTTTAGGGGCAGCGGGTGCTCTAGGGGCTACATATTGTCCACCCTATCTCACTGTTGATGGTGCTTATCATGCCCGACAATCAGGACAAACATCTGCAACAGCTATTTCAAGCAAGGAAAATAATGTGAATAAAGCTAATAATGAATGGAAATCACCACAGAAATCAGAGCCTGTAAATGATGAGTTTGGACAGAGGCAAAATAAGCCCCGCAGATACTCGGAGATGAATTTTGGGCAATGA 2013 0.4809 MATTTEEGVEYESDPEEATRSLAMRRRREASDDEEGDADADGRDSATADRRITHSDDSDGEGGVADYDDEEELEEEEEEEEEEEGEERVGLEHEHEHEGGANGTVVKDSDDADVKAPLEESGNGNEEEKKENEPFAVPTAGAFYMHDDRFRDNAGARHRRMRGGRRLWESKDDRKWGHDKFEEITLQERHYKEGRRPSKGNFRGRGGKTRGVDHSGRYVRGSRKGYDNRGNQTQAPKSVVRGRGPQRYEPTNKNNDSASQVQNKQPGKQPEKASHASLGKTFAPVSNSKSDPVPAKKQVFASNLNYASPPFYPSSSSNKDISVAPKGDVQTGGTGRIVRPGVVDEGFLVQQNNVLLRGKNVVDHVSMEKLYIDGPGTPSVGKAFNNMHIPLPGSSGVNPSQSAHPRGHGRSGAVPVQMNYPPVTSHNQPSKIDPTQLPAIQRTAPGRTSPSLQAPAPQVGNRPGSGSQASSPPKTSSAISSLDSGEIDAASDSDKLKGALVGKGRGAPQGSGRGSFVYGGAMGTAGNISGTHGDHNFPTFLPVMQFGGQHPGGIGVPAVGMAFPGYVGQPQLGLGNSEMTWLPVLTGAAGALGAAGALGATYCPPYLTVDGAYHARQSGQTSATAISSKENNVNKANNEWKSPQKSEPVNDEFGQRQNKPRRYSEMNFGQ* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3679 670 MobiDBLite consensus disorder prediction 1 136 - -
Gso11g3679 670 MobiDBLite consensus disorder prediction 314 333 - -
Gso11g3679 670 Pfam CASC3/Barentsz eIF4AIII binding 116 207 IPR018545 GO:0003729|GO:0006397|GO:0035145
Gso11g3679 670 MobiDBLite consensus disorder prediction 391 405 - -
Gso11g3679 670 MobiDBLite consensus disorder prediction 623 651 - -
Gso11g3679 670 Coils Coil 64 94 - -
Gso11g3679 670 MobiDBLite consensus disorder prediction 165 224 - -
Gso11g3679 670 MobiDBLite consensus disorder prediction 62 87 - -
Gso11g3679 670 MobiDBLite consensus disorder prediction 88 134 - -
Gso11g3679 670 MobiDBLite consensus disorder prediction 386 491 - -
Gso11g3679 670 MobiDBLite consensus disorder prediction 248 270 - -
Gso11g3679 670 MobiDBLite consensus disorder prediction 418 487 - -
Gso11g3679 670 PANTHER PROTEIN MLN51 HOMOLOG 1 670 - -
Gso11g3679 670 MobiDBLite consensus disorder prediction 623 670 - -
Gso11g3679 670 MobiDBLite consensus disorder prediction 41 61 - -
Gso11g3679 670 PANTHER PROTEIN MLN51 HOMOLOG 1 670 IPR044796 GO:0003729|GO:0006397|GO:0035145
Gso11g3679 670 MobiDBLite consensus disorder prediction 14 33 - -
Gso11g3679 670 SMART Btz_2 95 206 IPR018545 GO:0003729|GO:0006397|GO:0035145
Gso11g3679 670 MobiDBLite consensus disorder prediction 155 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3679 Gso-Chr11 52429088 52433725 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3679 - - gmx:100816837 1203.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0125 15 1097431 1102016 Gso11g3679 11 52429088 52433725 GST
Gso11g3679 11 52429088 52433725 Gso8g1724 8 16827663 16832682 PCT
Gso8g1724 8 16827663 16832682 Gso11g3679 11 52429088 52433725 PCT