Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3668 ATGCGATTCTCAAAAGCTTCCTTCTACACTCTTCTTCTCCGCAAACCTCATAACCATCACCATCAAAACTACGTCGTTTTATCGCGGCGTCGCGTAGTGACCTTGGCAGTGGGTGTGTTGATCTTGCTGAGTGCTCTCTACATTTTCTGGCCATCGGGTCCTGATCTGAAGATCGTGGGGCTGAAACTGAGGCGCATAAAGGTGCACCCTGTGCCGCCAATCACCATAGACATCTCCATGCTTCTCACGCTGAGGGTGCACAACGTTGACGTCTACTTCATGGACTTCGGAGCGGTTAACGTCGCCGTCGCCTACAGGGGGAAGATGCTGGGCCACGTGACGTCCAGGCGCATGCACGTGAGGGCCAGGGGGTCTTCCTACGTGGATGCTGACGTGGAATTTGCTGGCATCAGCGTGCTACCGGAGCTTGTGTTGCTGCTGGAGGACGTGGCCAGAGGTATCGTACCCTTTGATACCATTAGCCATGCTAAGGGCCAATTGGGCCTTCTCTTCTTTCACTTCCCCATCAAGGCAAAACTATCGTGTGAGGTTGTGGTCAGTATAATAAACCAGACCATTGTTCGTCAACATTGTCTCCACGAGTGA 606 0.5281 MRFSKASFYTLLLRKPHNHHHQNYVVLSRRRVVTLAVGVLILLSALYIFWPSGPDLKIVGLKLRRIKVHPVPPITIDISMLLTLRVHNVDVYFMDFGAVNVAVAYRGKMLGHVTSRRMHVRARGSSYVDADVEFAGISVLPELVLLLEDVARGIVPFDTISHAKGQLGLLFFHFPIKAKLSCEVVVSIINQTIVRQHCLHE* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3668 201 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 10 200 - -
Gso11g3668 201 PANTHER EXPRESSED PROTEIN 10 200 - -
Gso11g3668 201 SUPERFAMILY LEA14-like 39 149 - -
Gso11g3668 201 Pfam Late embryogenesis abundant protein 83 179 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3668 Gso-Chr11 52331901 52334045 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3668 - - gmx:100792375 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g3668 11 52331901 52334045 Gso8g1716 8 16757960 16766094 PCT
Gso8g1716 8 16757960 16766094 Gso11g3668 11 52331901 52334045 PCT