Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3554 ATGATGGCGAACCCATCTGGCAACCATCAAGAGCACACGCACGTGGTGTCGTCTTCTGCTCCGGAGACTTCAGGTGCGGCTCTCGCGATGAAGCACAATCCTGGCATATCCCTCGATTGGACCGCAGAAGAACAAGCCATTCTCGAAGATGGACTCTCCAAGTATGCCTCAGAATCCAACATAGTACGCTATGCAAAGATAGCCCTACAGCTACAGCAAAAAACGGTTCGTGATGTAGCACTGCGAGTCAGGTGGATGAATAAGAAAGAAAATAGCAAGAGAAGGAAGGATGATCATAATTTAACTCGGAAAAGTAAAGATAAAAAGGAAAGGGTTTCTGATCCCGCAGTAAAGTCATCTAACTTCGTTGCTCGGTCCAATGTCTCCCCATATGCTCCACCAATGATTGCAATGGACAATGATGATGGCATCTCTTATACAGCAATTGGAGGTCCCACCGGTGACCTATTAGAGCAAAATGCACAGGCCTTGAATCAAATCTCCACAAATCTTTCTGCTTTCCAGGTACAGGAGAACATCAATCTTTTCTGCCAAACTAGAGATAACATCCTTAAAATTATGAACGAGTTGAATGACTCGCCAGAGGTGATGAAGCAAATGCCACCTCTTCCTGTGAAGGTGAATGAAGAGCTAGCCAATTCCATACTCCCAAGAACAAATCTTCCACCACAATCATGA 699 0.4506 MMANPSGNHQEHTHVVSSSAPETSGAALAMKHNPGISLDWTAEEQAILEDGLSKYASESNIVRYAKIALQLQQKTVRDVALRVRWMNKKENSKRRKDDHNLTRKSKDKKERVSDPAVKSSNFVARSNVSPYAPPMIAMDNDDGISYTAIGGPTGDLLEQNAQALNQISTNLSAFQVQENINLFCQTRDNILKIMNELNDSPEVMKQMPPLPVKVNEELANSILPRTNLPPQS* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3554 232 MobiDBLite consensus disorder prediction 1 24 - -
Gso11g3554 232 MobiDBLite consensus disorder prediction 90 118 - -
Gso11g3554 232 MobiDBLite consensus disorder prediction 1 25 - -
Gso11g3554 232 Pfam Protein of unknown function (DUF3755) 173 206 IPR022228 -
Gso11g3554 232 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 19 226 - -
Gso11g3554 232 CDD SANT 40 89 IPR001005 -
Gso11g3554 232 Gene3D - 39 89 - -
Gso11g3554 232 PANTHER BNAC01G39810D PROTEIN 19 226 - -
Gso11g3554 232 MobiDBLite consensus disorder prediction 90 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3554 Gso-Chr11 51319219 51325392 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3554 - - gmx:100819879 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0250 15 2269581 2274850 Gso11g3554 11 51319219 51325392 GST
Gso11g3554 11 51319219 51325392 Gso12g0418 12 3648016 3653110 PCT
Gso11g3554 11 51319219 51325392 Gso11g1071 11 9568936 9574808 PCT
Gso12g0418 12 3648016 3653110 Gso11g3554 11 51319219 51325392 PCT
Gso11g1071 11 9568936 9574808 Gso11g3554 11 51319219 51325392 PCT