Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3379 ATGGCCACCAACATTCGTAGAGCAACCTATCGCTTTCTCCCTGCCATGGACACAGATTCTTTCTCCGATTCCACCTTCGAATTCCACGAATCCGATCTCTACAACTCCGCGCGCGCTAACTCTCCCGAACTTGCCAAATCCGTACGCTCCTCCAGATTTCACAACTACTCCTCTTCCTCTGCCGCCCGCGTCGGTGCTCCGGCGTCGCTTCCGGTGAACGTGCCGGACTGGTCGAAGATTCTCGGCGATGAGTACGGACGGAACCAGAGGAGGAACTACGACGACGACGACGAAGCGCGGAGCGATGAGGAAGATGGAGTTGGGAGAGTGCCTCCGCACGAGTTTCTGGCGAGGACGAGAATCGCTTCGTTCTCGGTGCACGAAGGAGTTGGGAGGACTCTCAAAGGACGCGATCTCAGTAGGGTTCGAAACGCGATTTGGGCTAAAACGGGATTCCAGGACTAG 465 0.5656 MATNIRRATYRFLPAMDTDSFSDSTFEFHESDLYNSARANSPELAKSVRSSRFHNYSSSSAARVGAPASLPVNVPDWSKILGDEYGRNQRRNYDDDDEARSDEEDGVGRVPPHEFLARTRIASFSVHEGVGRTLKGRDLSRVRNAIWAKTGFQD* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3379 154 Pfam Senescence regulator 39 154 IPR007608 -
Gso11g3379 154 PANTHER EMB|CAB72159.1 4 154 - -
Gso11g3379 154 PANTHER EMB|CAB72159.1 4 154 - -
Gso11g3379 154 MobiDBLite consensus disorder prediction 75 110 - -
Gso11g3379 154 MobiDBLite consensus disorder prediction 83 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3379 Gso-Chr11 49687804 49688713 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3379 - - gmx:100814909 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g3379 11 49687804 49688713 Gso12g0621 12 5801682 5802688 PCT
Gso11g3379 11 49687804 49688713 Gso11g1509 11 17618980 17620068 PCT
Gso12g0621 12 5801682 5802688 Gso11g3379 11 49687804 49688713 PCT
Gso11g1509 11 17618980 17620068 Gso11g3379 11 49687804 49688713 PCT