Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g3280 ATGCGAATTAAGCCAATCCTGCTCCCGGAGCCGCCCAGCCCCACGGCGGCGCGTGGCACTCCCGACATCTTCGAATCCGGTGTCCACACCCTCGTCCGCCGCGCCGTTGTCATCGGCAACGGTTTCCCCTCCTCCGAGAATCACAGCATCGGTTTGCTCCGCGCCCTTGGCCTCTCCCACGACCACCTCCTATTCCGCGTTACGAGGCCGAGAGGTGGAATCGACGATTGGCTCCATTGGTTTCCCCTCTCTCTCCATCGAAAATTTCATTACCTAATTTCCATGTTCCGCGCCTTCTCCTCCAAATCTAACTACCTACCCCTCACTTCCCACCCTAACGGCTTGTCCTCTATCCTCCAAGCCGATGCCAATCACATAGTCAATTTAGCTCGCGAAACTTATGAAAAGGAGGGACCGTTATTGGTAGTTGCATCTGGAAGAGACACAATTTCTGTTGCGAGTTCCATAAAACGTTTAGCTCCTGATCTTGTTTTTGTTGTTCAGATACAACATCCAAGGTCTCATTTGAATAGGTTTGACATGGTAATTACACCTCATCATGATTATTATCCTTTGACTCCAGAAGGACAGAAGCAGGTTCCTAAGTTTCTTAGAAGGTGGATAACTCCACGCGAGCCTCCAGATAGTCATGTGGTTCTGACATTGGGAGCCTTACATCGAATAGATTTTGCTTCACTTCGCAGTGCTGCCATTGCATGGCAAGATGTGTTTGCAAATGTTCCAAGGCCATTGCTCGTGGTCAACATTGGAGGCCCAACAAAAAACTGTCAATATGGTGTTGACCTTGCAAAGCAGTTAGCAACATCTTTGATCAGTGTTCTTGGTAGTTGTGGGAGTGTAAGAATATCCTTTTCTGATAGGACTCCACAAAAGGTATCCAATATTATAGTGAAAGAACTTGGAAATAATCGGAAAGTTTATATTTGGGATGGGCAAGAACCAAACCCACATATGGGGCATCTGGCTTGGGCTGATGCATTTGTTGTCACAGCAGATTCAGTTAGCATGATAAGTGAAGCTTGCAGCACCGGGAAGCCTGTGTATATTATGGGAGCTGAGCTTTGCAGATGGAAATTCACAGAATTCCACAAATCATTGAGAGAACGGGGAGTTGCTAGGCCTTTTACAGGGTCTGAGGATATATCGGAAAATTGGAGTTATCCACCCCTTGATGACACTGCTGATGCAGCTAGACGGGTTCATGAAGCGCTTGCTGCCCGAGGGTGGAAACTGAAGATATAG 1263 0.4766 MRIKPILLPEPPSPTAARGTPDIFESGVHTLVRRAVVIGNGFPSSENHSIGLLRALGLSHDHLLFRVTRPRGGIDDWLHWFPLSLHRKFHYLISMFRAFSSKSNYLPLTSHPNGLSSILQADANHIVNLARETYEKEGPLLVVASGRDTISVASSIKRLAPDLVFVVQIQHPRSHLNRFDMVITPHHDYYPLTPEGQKQVPKFLRRWITPREPPDSHVVLTLGALHRIDFASLRSAAIAWQDVFANVPRPLLVVNIGGPTKNCQYGVDLAKQLATSLISVLGSCGSVRISFSDRTPQKVSNIIVKELGNNRKVYIWDGQEPNPHMGHLAWADAFVVTADSVSMISEACSTGKPVYIMGAELCRWKFTEFHKSLRERGVARPFTGSEDISENWSYPPLDDTADAARRVHEALAARGWKLKI* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g3280 420 Pfam Mitochondrial fission ELM1 45 411 IPR009367 -
Gso11g3280 420 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 139 359 - -
Gso11g3280 420 MobiDBLite consensus disorder prediction 1 20 - -
Gso11g3280 420 PANTHER OS02G0535700 PROTEIN 4 419 IPR009367 -
Gso11g3280 420 PANTHER MITOCHONDRIAL FISSION PROTEIN ELM1 4 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g3280 Gso-Chr11 48640522 48645551 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g3280 - - gmx:100784429 858.596
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g1568 12 39156976 39161092 Gso11g3280 11 48640522 48645551 GST
Gso11g3280 11 48640522 48645551 Gso12g0745 12 7504782 7509506 PCT
Gso11g3280 11 48640522 48645551 Gso11g1371 11 15625091 15629498 PCT
Gso12g0745 12 7504782 7509506 Gso11g3280 11 48640522 48645551 PCT
Gso11g1371 11 15625091 15629498 Gso11g3280 11 48640522 48645551 PCT