Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g2958 ATGGAAATCAGCTCAAGGCTTCAAGAAAGAGAGAACCACAACCACATCCATAACCATAACCACCCTTCTCCTATGAACTCTCCAACAAGCAATGTGAGCAACTGCATGAGCAGCAGCAACAGCAATGGCATCCAAATCCCAACACCACCACTCACTCCCAAAACCATTCCCAGATCTGATTCCAACCCTTACCCTACCACTTTTGTCCAAGCTGACACCTCCACTTTCAAGCAAGTAGTCCAAATGCTAACTGGCTCATCAGACACCACAAAACAAGCATCACAAGATCCACAACCACCATCATCATCATCATCCAGAAACTTCAACATACCCCCCATCAAGGCCCCACCAAAGAAGCAACAAGGAGGCTTCAAGCTCTATGAGAGGAGGAACAGCCTCAAGAACAGCCTCATGCTCAACACCTTGATGCCCAATTTTGCTTATAATCACAACAACAATTCTCCAAGCTTCTCACCAAGAAACAACATGCCTGAGATCCTCTCCCCAAGCCTTCTTGACTTCCCTTCCCTTGCTCTAAGCCCTGTTACACCATTGAATGATGACCCTTTTGACAAGTCCTCCCCTTCATTGGGGAACTCGTCAGAGGAGGATAAAGCCATAGCTGAAAAGGGCTTCTACTTGCATCCCTCTCCCATGACCACTCCAAGAGACTCAGAACCACAGCTCTTGCCTTTGTTCCCAGTTACCTCACCTAGAGTCTCATCACAATCACCTTCTTGA 741 0.4723 MEISSRLQERENHNHIHNHNHPSPMNSPTSNVSNCMSSSNSNGIQIPTPPLTPKTIPRSDSNPYPTTFVQADTSTFKQVVQMLTGSSDTTKQASQDPQPPSSSSSRNFNIPPIKAPPKKQQGGFKLYERRNSLKNSLMLNTLMPNFAYNHNNNSPSFSPRNNMPEILSPSLLDFPSLALSPVTPLNDDPFDKSSPSLGNSSEEDKAIAEKGFYLHPSPMTTPRDSEPQLLPLFPVTSPRVSSQSPS* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g2958 246 MobiDBLite consensus disorder prediction 84 110 - -
Gso11g2958 246 MobiDBLite consensus disorder prediction 1 68 - -
Gso11g2958 246 MobiDBLite consensus disorder prediction 19 49 - -
Gso11g2958 246 Pfam VQ motif 63 89 IPR008889 -
Gso11g2958 246 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 1 246 IPR039611 -
Gso11g2958 246 MobiDBLite consensus disorder prediction 185 246 - -
Gso11g2958 246 MobiDBLite consensus disorder prediction 84 123 - -
Gso11g2958 246 MobiDBLite consensus disorder prediction 187 201 - -
Gso11g2958 246 MobiDBLite consensus disorder prediction 1 18 - -
Gso11g2958 246 PANTHER VQ MOTIF PROTEIN 1 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g2958 Gso-Chr11 45378204 45380037 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g2958 - - gmx:100818804 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso15g0648 15 5767553 5768563 Gso11g2958 11 45378204 45380037 GST
Gso7g1678 7 38826370 38829535 Gso11g2958 11 45378204 45380037 PCT
Gso11g2958 11 45378204 45380037 Gso12g1270 12 26081563 26083314 PCT
Gso11g2958 11 45378204 45380037 Gso6g2021 6 36196145 36197273 PCT
Gso11g2958 11 45378204 45380037 Gso7g1678 7 38826370 38829535 PCT
Gso12g1270 12 26081563 26083314 Gso11g2958 11 45378204 45380037 PCT
Gso6g2021 6 36196145 36197273 Gso11g2958 11 45378204 45380037 PCT