Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1536 ATGATGAACAAGCAATCTGTCTTGCCCTTCTCACTAGCATTGCTAGTTTCATTTTTAAATTGCACCACCACTTTAGCCCAATTATCACCAGCTTCTGCCCCTCTCAAACCACCCCAACCTGCTCCTACCATACCAGCTGCTGCTCCTCAGCAACCATTGGTTCCTTCATTGCCACAATCACCAAGTGATTCCACCCCTGACAGTACTCCAACTGTTGACATTGTTGGAATCCTGAGAAAGGCAAAGTCATTCAACATCCTAATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAGCTCCTCACTACTAAATCCGGAGGCATCACCATTCTTGCCCCAGATGACAGTTCCTTCTCTGAACTCAAAGCTGGCTTCCTCAACTCTCTTTCTGATGGCCAAAAGCTCGAGCTCTTACAGTTCCACGTTATTTCAGACTACGTGTCTAGCTCCAACTTTGATACACTGACCAACCCCGTGAGAACACTGGCAGGGGCTAAACCTGGAAAGGTGGAACTTAATGTGATAAGTTATGGAGGGAGTGTGAACATCTCAACGGGTGAGGTTAACACCACCGTCACTGGCATTATATATACCGATAAACATCTTGCTATATATAAGGTGGGTAAGGTGCTTCTTCCTATGGACTTCTTTGTTGTTGCCAAGGCACCTGCAAAGGCACCCTCGTTGGCACCAGAACCTTCAAGTGGCGTGGCAAAGGGGCCTAAAGCTGATAAGGATGAGTCATCATCTTCAGATTCGTCACAGGTTAATTCCACTGATCAGAACTCTGGCACTGCCAAGATGATCAGTGCGTATGGAATGTGGGTGTCACTTGTTCTTGGAGTACTTCTCATGAGTGTGATGACAACGTAA 885 0.4655 MMNKQSVLPFSLALLVSFLNCTTTLAQLSPASAPLKPPQPAPTIPAAAPQQPLVPSLPQSPSDSTPDSTPTVDIVGILRKAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSSFSELKAGFLNSLSDGQKLELLQFHVISDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTVTGIIYTDKHLAIYKVGKVLLPMDFFVVAKAPAKAPSLAPEPSSGVAKGPKADKDESSSSDSSQVNSTDQNSGTAKMISAYGMWVSLVLGVLLMSVMTT* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1536 294 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 294 IPR045003 -
Gso11g1536 294 SUPERFAMILY FAS1 domain 67 218 IPR036378 -
Gso11g1536 294 MobiDBLite consensus disorder prediction 33 56 - -
Gso11g1536 294 MobiDBLite consensus disorder prediction 31 71 - -
Gso11g1536 294 SMART fasc_3 113 218 IPR000782 -
Gso11g1536 294 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 294 - -
Gso11g1536 294 MobiDBLite consensus disorder prediction 57 71 - -
Gso11g1536 294 MobiDBLite consensus disorder prediction 230 267 - -
Gso11g1536 294 Gene3D FAS1 domain 56 217 IPR036378 -
Gso11g1536 294 ProSiteProfiles FAS1/BIgH3 domain profile. 71 215 IPR000782 -
Gso11g1536 294 Pfam Fasciclin domain 83 217 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1536 Gso-Chr11 17823777 17824983 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1536 - - gmx:100795847 434.876