Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1530 ATGAAGCAAGCAACCCTTTTCTCCTTCTCACTCTTTCTACTCTTTTCCGCCACCACCTTTGCCATTTCACCTGCACCTGCAGCAGCCCCAAAAGCCCCAGCAAAACCACCCCCTACCCCCAAGGCAACAGCACCATCACCAAAACCATTAGTCCCCACTTTACCTCAGTCTCCAAACTCCCCTGACTCAGTCCCCGACGACATCACCAGAATCCTCAAAAAGGCCAAAATGTTCTCAGTCCTAATCCGCCTCTTGAAAACCACCGAAATCATGAACAACATAAACTCACAGCTCATAACAGCCAAGAGTGGAGGCATAACCATCCTTGCACCAGATGATTCTGCTTTTTCCAACCTCAAAGCAGGTTTCCTCAACTCTCTAAACGAAGGCCAGAAAATCGAACTTGTGCAGTTGCACATATTGCCAGAGTTTGTGTCGAGCTCAAACTTCGATTCTCTGAGCAACCCTGTGCAGACAGTGGCTGGAAAAGACCCAGCAAGGCTTCCACTGAACGTGAATGCATTAGGTAACAGTGTCAACATTTCAACTGGGGTCGTCAACGCCAACGTTCTCGGGGTAGTATACTCAGATAACAAGCTTGGGATTTATCACGTGGACAAGGTGCTTCTTCCTCTAGATTTCTTTGTAACCAACAAGGCTCCAGCTTTGGCTCCAACAACTCTTGCAAAAGCTCCCAAATCTGCAAAGGATAACTCTTCAGAGGACGATCAAGAAGGAACAAACCAGCATCAGAATAAATCTGGGGCAGTGAGTGTGGTTAGCATTGGCCGAACAACGTTGATGTTGCTTGGGATAGCTTTGGTGGCAGTGGCAACCATGGGCCTTATTTCCAACATGGAGTTGATCCATTTGGCAGCTGCATTTTCAATTTTCTTCGCCAAACACTGTTAA 912 0.4726 MKQATLFSFSLFLLFSATTFAISPAPAAAPKAPAKPPPTPKATAPSPKPLVPTLPQSPNSPDSVPDDITRILKKAKMFSVLIRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSNLKAGFLNSLNEGQKIELVQLHILPEFVSSSNFDSLSNPVQTVAGKDPARLPLNVNALGNSVNISTGVVNANVLGVVYSDNKLGIYHVDKVLLPLDFFVTNKAPALAPTTLAKAPKSAKDNSSEDDQEGTNQHQNKSGAVSVVSIGRTTLMLLGIALVAVATMGLISNMELIHLAAAFSIFFAKHC* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1530 303 SMART fasc_3 107 212 IPR000782 -
Gso11g1530 303 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 280 IPR045003 -
Gso11g1530 303 MobiDBLite consensus disorder prediction 29 59 - -
Gso11g1530 303 Pfam Fasciclin domain 77 211 IPR000782 -
Gso11g1530 303 MobiDBLite consensus disorder prediction 227 254 - -
Gso11g1530 303 PANTHER FASCICLIN DOMAIN PROTEIN 4 280 - -
Gso11g1530 303 Gene3D FAS1 domain 53 211 IPR036378 -
Gso11g1530 303 MobiDBLite consensus disorder prediction 27 65 - -
Gso11g1530 303 ProSiteProfiles FAS1/BIgH3 domain profile. 65 209 IPR000782 -
Gso11g1530 303 SUPERFAMILY FAS1 domain 46 212 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1530 Gso-Chr11 17788216 17789441 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1530 - - gmx:102665444 524.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0571 12 5127613 5128705 Gso11g1530 11 17788216 17789441 GST