Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1526 ATGAGAGGGACACAGATACTGTTCGTTGGTTTGCTTTGGTTCTTCTGCGTTTATGCACCTTCTTCGTTTTGCGCAAATGTCACGTATGACCACAGAGCATTGGTCATCGATGGCAAGCGCCGTGTCTTGGTCTCTGGTTCTATTCATTACCCTCGTAGCACTCCAGAGATGTGGCCAGACCTCATTCAGAAATCCAAAGATGGAGGACTTGATGTGATTGAGACTTATGTTTTCTGGAACTTACATGAACCAGTTCAAGGCCAGTATAATTTTGAAGGAAGGGCAGATTTGGTTAAATTTGTGAAGGCAGTAGCAGCAGCAGGTCTATATGTGCATCTCCGGATTGGTCCATACGCATGTGCTGAATGGAACTACGGTGGTTTCCCTCTTTGGCTACATTTTATTCCGGGTATTCAGTTCCGAACTGACAACAAACCATTCGAGGCAGAAATGAAGCGGTTCACTGTTAAGATTGTGGATATGATGAAGCAAGAGAGCCTCTATGCCTCACAAGGAGGACCCATTATTTTGTCTCAGGTTGAAAATGAGTATGGGAACATTGATGCGGCCTATGGTCCTGCTGCTAAATCCTACATCAAATGGGCAGCATCAATGGCAACATCTCTTGACACAGGGGTTCCTTGGGTAATGTGCCAACAGGCAGATGCTCCTGATCCAATTATTAACACGTGCAATGGATTTTACTGCGATCAATTCACACCAAATTCTAATGCAAAACCAAAAATGTGGACTGAGAATTGGAGTGGATGGTTTCTTTCATTTGGTGGTGCTGTGCCTTACAGACCAGTAGAAGATCTTGCTTTTGCTGTGGCACGCTTTTACCAGCGAGGTGGAACTTTTCAAAATTACTATATGTACCACGGAGGCACTAATTTTGGCCGAACTACTGGTGGACCTTTCATTTCTACTAGTTATGATTATGATGCACCAATTGATGAGTATGGAATTATTAGACAGCCTAAATGGGGCCACCTTAAAGATGTGCATAAGGCCATAAAGCTTTGTGAAGAAGCCTTGATAGCAACTGATCCAACAATTACATCTCCTGGACCAAATATAGAGGCTGCAGTTTACAAGACAGGATCTATATGTGCTGCCTTCCTTGCCAACATTGCCACATCTGATGCAACAGTGACCTTTAATGGAAATTCATATCACTTGCCTGCATGGTCTGTGAGCATCTTACCAGACTGCAAGAATGTAGTGCTAAATACTGCAAAGATTAATTCTGCATCTATGATTTCAAGCTTCACAACTGAATCTTTCAAAGAAGAGGTTGGATCTTTGGATGATTCTGGCTCGGGATGGAGTTGGATTAGTGAGCCTATTGGTATTTCAAAGTCTGATTCATTTTCAAAATTTGGATTACTGGAGCAAATAAATACAACTGCTGATAAAAGTGATTACTTATGGTACTCGATAAGCATTGATGTTGAAGGTGATTCTGGTTCTCAAACTGTCCTTCACATTGAATCCCTTGGTCATGCCCTTCATGCTTTCATAAATGGGAAGATTGCAGGGAGTGGAACTGGCAACAGTGGCAAAGCTAAAGTCAATGTGGACATCCCCGTCACACTAGTGGCTGGGAAGAATTCAATTGATCTCCTGAGTTTAACTGTGGGACTTCAGAACTATGGAGCTTTTTTTGACACATGGGGTGCAGGGATCACTGGTCCAGTGATACTGAAAGGTTTGAAGAATGGAAGCACTGTTGATCTCTCCTCCCAGCAGTGGACATATCAGGTTGGCCTTAAATATGAAGATTTAGGTCCATCTAATGGCAGTTCTGGACAGTGGAATTCACAATCTACCTTACCTACAAATCAATCCTTGATTTGGTACAAGACAAACTTTGTTGCTCCCTCTGGAAGTAATCCAGTTGCAATTGACTTCACGGGGATGGGAAAAGGTGAGGCTTGGGTGAATGGACAGAGCATTGGACGGTACTGGCCTACATATGTTTCTCCGAATGGTGGTTGTACCGACTCGTGCAATTATAGAGGGGCCTATAGTTCATCCAAATGTCTCAAGAACTGCGGAAAACCATCACAGACATTATACCACATACCACGATCATGGTTACAACCAGATAGCAACACACTTGTATTGTTTGAGGAGAGTGGAGGCGACCCTACACAAATATCTTTCGCTACAAAACAGATAGGAAGCATGTGTTCACATGTATCTGAATCTCACCCTCCACCTGTTGACTTGTGGAATTCAGATAAAGGAAGAAAAGTAGGGCCTGTATTGTCACTGGAGTGCCCTTATCCTAATCAGTTGATCTCTTCCATTAAATTTGCAAGTTTTGGAACGCCTTATGGGACTTGTGGGAACTTCAAACATGGGCGGTGCAGAAGTAATAAGGCTCTATCCATTGTGCAGAAGGCCTGCATTGGATCAAGTAGTTGTAGAATTGGAATATCGATTAATACATTCGGAGATCCATGTAAAGGAGTAACAAAAAGTTTAGCTGTTGAAGCTTCTTGTGCATAG 2517 0.4283 MRGTQILFVGLLWFFCVYAPSSFCANVTYDHRALVIDGKRRVLVSGSIHYPRSTPEMWPDLIQKSKDGGLDVIETYVFWNLHEPVQGQYNFEGRADLVKFVKAVAAAGLYVHLRIGPYACAEWNYGGFPLWLHFIPGIQFRTDNKPFEAEMKRFTVKIVDMMKQESLYASQGGPIILSQVENEYGNIDAAYGPAAKSYIKWAASMATSLDTGVPWVMCQQADAPDPIINTCNGFYCDQFTPNSNAKPKMWTENWSGWFLSFGGAVPYRPVEDLAFAVARFYQRGGTFQNYYMYHGGTNFGRTTGGPFISTSYDYDAPIDEYGIIRQPKWGHLKDVHKAIKLCEEALIATDPTITSPGPNIEAAVYKTGSICAAFLANIATSDATVTFNGNSYHLPAWSVSILPDCKNVVLNTAKINSASMISSFTTESFKEEVGSLDDSGSGWSWISEPIGISKSDSFSKFGLLEQINTTADKSDYLWYSISIDVEGDSGSQTVLHIESLGHALHAFINGKIAGSGTGNSGKAKVNVDIPVTLVAGKNSIDLLSLTVGLQNYGAFFDTWGAGITGPVILKGLKNGSTVDLSSQQWTYQVGLKYEDLGPSNGSSGQWNSQSTLPTNQSLIWYKTNFVAPSGSNPVAIDFTGMGKGEAWVNGQSIGRYWPTYVSPNGGCTDSCNYRGAYSSSKCLKNCGKPSQTLYHIPRSWLQPDSNTLVLFEESGGDPTQISFATKQIGSMCSHVSESHPPPVDLWNSDKGRKVGPVLSLECPYPNQLISSIKFASFGTPYGTCGNFKHGRCRSNKALSIVQKACIGSSSCRIGISINTFGDPCKGVTKSLAVEASCA* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1526 838 Pfam Beta-sandwich domain in beta galactosidase 346 415 IPR041392 -
Gso11g1526 838 PANTHER BETA-GALACTOSIDASE 5 832 - -
Gso11g1526 838 PANTHER BETA-GALACTOSIDASE RELATED 5 832 IPR001944 GO:0004553|GO:0005975
Gso11g1526 838 Pfam Galactose binding lectin domain 760 837 IPR000922 GO:0030246
Gso11g1526 838 Coils Coil 832 838 - -
Gso11g1526 838 SUPERFAMILY Galactose-binding domain-like 399 572 IPR008979 -
Gso11g1526 838 SUPERFAMILY (Trans)glycosidases 27 343 IPR017853 -
Gso11g1526 838 SUPERFAMILY Galactose-binding domain-like 585 751 IPR008979 -
Gso11g1526 838 ProSiteProfiles SUEL-type lectin domain profile. 752 838 IPR000922 GO:0030246
Gso11g1526 838 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 172 184 IPR019801 GO:0004553|GO:0005975
Gso11g1526 838 Gene3D - 753 838 IPR043159 -
Gso11g1526 838 Gene3D - 421 570 - -
Gso11g1526 838 Pfam Glycosyl hydrolases family 35 34 338 IPR031330 -
Gso11g1526 838 Gene3D Glycosidases 22 342 - -
Gso11g1526 838 PRINTS Glycosyl hydrolase family 35 signature 37 54 IPR001944 GO:0004553|GO:0005975
Gso11g1526 838 PRINTS Glycosyl hydrolase family 35 signature 58 76 IPR001944 GO:0004553|GO:0005975
Gso11g1526 838 PRINTS Glycosyl hydrolase family 35 signature 113 132 IPR001944 GO:0004553|GO:0005975
Gso11g1526 838 PRINTS Glycosyl hydrolase family 35 signature 170 185 IPR001944 GO:0004553|GO:0005975
Gso11g1526 838 PRINTS Glycosyl hydrolase family 35 signature 249 264 IPR001944 GO:0004553|GO:0005975
Gso11g1526 838 PRINTS Glycosyl hydrolase family 35 signature 286 301 IPR001944 GO:0004553|GO:0005975
Gso11g1526 838 PRINTS Glycosyl hydrolase family 35 signature 306 322 IPR001944 GO:0004553|GO:0005975
Gso11g1526 838 PRINTS Glycosyl hydrolase family 35 signature 616 630 IPR001944 GO:0004553|GO:0005975
Gso11g1526 838 PRINTS Glycosyl hydrolase family 35 signature 643 659 IPR001944 GO:0004553|GO:0005975
Gso11g1526 838 Gene3D - 588 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1526 Gso-Chr11 17744082 17751491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1526 24 693 Glycoside Hydrolase AT2G28470 77.400 0.0 1094
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1526 - - gmx:100793198 1714.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1526 11 17744082 17751491 Gso11g1526 11 17744082 17751491 ECH