Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1479 ATGGGCGAGGTGGGGAAGATACTGTACATAGTGGTGGTCGAGGACTCCGAAAAGAAAGAGTCCTTTCGCTACTCGCGTCCCGTTCTGCAGAGCACGCTCCAGCTCATGGGATGCAAAGCGCGTCACGCCTTCAAGATCAGCCAAAGAGTTTTTGAACAAACAAGGAAAGAGAATTCTACTGATATTTTGAAGCTGGAAGTAGAGGCTTTATCAGGTTTTGATGCTTTCAAGAAGAATTTTGTGAAGAAAGATGGTAGGAGTGTACCATTTGAGTTGTACAAAAGGCGCACATCTGCATTTGTTCGGAGAGAAACTTTTCTAGATATTGCCTGTGATGCTCTGGCAGAGTACAAGTATGTGGGTCCTAACCAGAGAGCAGACTTGGTATTAGCCTGCAGGATCCGTGAAAGGAAAGAGTCGGTGACAGTGTTACTATGTGGCACTAGTGGCTGCGGCAAATCTACATTGTCTGCATTGCTGGGAAGTAGGTTGGGAATCACGACAGTGGTATCGACCGATTCTATTCGGCACATGATGAGAAGTTTTGCTAATGAGAAAGAAAACCCCTTGTTGTGGGCTTCTACGTACCATGCAGGGGAGTGTTTGGACCCTGTTGCTGTTGCAGAAGCAAAGGCTAGAAGGAAAGCAAAAAAGCTGGCTGGTGTGTCACATTCAGTTTCCAAGGAAGATGTAACTGAGGGTCACAATTCTAGCAAATTTGATGTTAGGACGTTGGAGATGAGCTCTGGTCCTACTGAACTGCTAAGTCCAAAACAGATGGCTATTGAAGGATTCAAGGCACAGAGTGAGATGGTGATTGACAGTCTTGATAGGTTAATCACTGCATGGGAAGAACGAAAAGAGTCTGTTGTCGTGGAGGGAGTTCATTTGAGCCTCAACTTTGTTATGGGGCTCATGAAGAAACATCCTTCAATTATACCATTTATGATACACATTACAAATGAGGATAAACACTTGGAAAGATTTGCTGTACGTGCAAAGTATATGACTCTGGACCCAGCTAAAAACAAGTATGTGAAGTATATTAGAAACATCAGAACAATCCAGGAATATCTCTGCAAGCGTGCTGAAAAACATTTAGTTCCCCAAATAAACAATACCAATGTTGACAAGAGTGTAGCAGCCATTCATGCAACGGTGTTCAGCTGTCTTCGAAGGCGTGAGGTTGGGGAACAACTATATGATCCTGTTAGAAATACTGTGACTGTTGTTTATGAGGAATATAGAAATCAATGTGCAGCCAATTCTTTGAGCTCGAAAGGAATGTTTCAACTGATCCAAAGAAAAGGTTCTTCAAGGAATCTGATGGCTCTTGTTAATGATGATGGATCTGTGGCAAAGGCTTGGCCTGTTAATTTAGTTGACTGTAATGGGAAGCCTGTATGGTGCCATGGACCTGAGAATGGAGTTGGACATCCAATGTATGGTCCCTTAAGAATTGGCAAGGCAGAACCTGTCAATCTTCAGTTTGGTTTTTATGGGATCAGTGCATGGCCAAGTGATGGTGGCACTAGTCGTGCTGGAAGTGTTGATGAGTCTAGAGCTGATGGGACTGATACTGGTAGTAGATATGTATCCTCTTGCTGTAGCTCGCCAAGGATGTCGGATGTTGCTGCAAAGGAGCTCAAGGAAGATTTCTCAGTGCATGGTAGTGATGAAGAGATTGACGATCAACCAGAGGTGGGCAGTGATGAGGATTTTAGTGATGATGGCGGCAAACATGCCCTTGAAGAGGTAGGATCAGTTGATGAGGAATCAACAAAATCCGACGAAGAGTATGATGATCTTGCGATGCAAGACGTGCTGGAAACTGGATATTGGTCAGATGATGAAGAGTATAGGATCAGGGTAGATGGTGTTTCCGGTGAACTTGGAACTAAAATGCATGGGGGGTACAAGTATCGTCGGAACCTGGATATTTTCCTTAGAAGTAGAAGCGAGTTGGCAGAGCCACTATGTTCTTATTCTTCTTTGCTCGTGGAAAAGAATGAGAGGAAATCCAAATTAAGAACACGTTCTCTTAGTATTCCTGCATTAGGAAAGCATCGTTCAGCAGTGAATGATCCCATCCTTTCTGGTGCTCCTCAGAGGTAG 2115 0.4397 MGEVGKILYIVVVEDSEKKESFRYSRPVLQSTLQLMGCKARHAFKISQRVFEQTRKENSTDILKLEVEALSGFDAFKKNFVKKDGRSVPFELYKRRTSAFVRRETFLDIACDALAEYKYVGPNQRADLVLACRIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVVSTDSIRHMMRSFANEKENPLLWASTYHAGECLDPVAVAEAKARRKAKKLAGVSHSVSKEDVTEGHNSSKFDVRTLEMSSGPTELLSPKQMAIEGFKAQSEMVIDSLDRLITAWEERKESVVVEGVHLSLNFVMGLMKKHPSIIPFMIHITNEDKHLERFAVRAKYMTLDPAKNKYVKYIRNIRTIQEYLCKRAEKHLVPQINNTNVDKSVAAIHATVFSCLRRREVGEQLYDPVRNTVTVVYEEYRNQCAANSLSSKGMFQLIQRKGSSRNLMALVNDDGSVAKAWPVNLVDCNGKPVWCHGPENGVGHPMYGPLRIGKAEPVNLQFGFYGISAWPSDGGTSRAGSVDESRADGTDTGSRYVSSCCSSPRMSDVAAKELKEDFSVHGSDEEIDDQPEVGSDEDFSDDGGKHALEEVGSVDEESTKSDEEYDDLAMQDVLETGYWSDDEEYRIRVDGVSGELGTKMHGGYKYRRNLDIFLRSRSELAEPLCSYSSLLVEKNERKSKLRTRSLSIPALGKHRSAVNDPILSGAPQR* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1479 704 MobiDBLite consensus disorder prediction 509 534 - -
Gso11g1479 704 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 1 700 - -
Gso11g1479 704 Gene3D - 142 387 IPR027417 -
Gso11g1479 704 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 2 1 700 - -
Gso11g1479 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 142 393 IPR027417 -
Gso11g1479 704 MobiDBLite consensus disorder prediction 553 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1479 Gso-Chr11 17199809 17206701 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1479 - - gmx:100807339 1390.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1479 11 17199809 17206701 Gso11g1479 11 17199809 17206701 ECH
Gso12g0643 12 6124902 6131794 Gso11g1479 11 17199809 17206701 GST