Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1478 ATGAGCAATTCTCACTCTGAAAATCATGATGAAGTAACTGTGGCGGGATTTGAAGTTCCAAAATCTCCTGATTCTAGTTATAACAATGTCTACCCTGGAAATGAAGATGAGGCAAGGGATCCACCTATGGTCCCTTCACATTTACAGCATACTTTGCTAAATTATCCTGCTAATAGAGACACTGCAGGAACTGTTCCATTGCCTCAGAATGTGATTCTAAATCATCTTTACATCGAGAATAGAGAATCACCAAGATCTGTGGTGGCGTTGGGATTCACTCATCGTTTCCACTCTAAATATGTTACAGTCGTGCTTTACAAACCAGTCCAAAGAAGGGGAAATACAAGCATTTAG 354 0.4011 MSNSHSENHDEVTVAGFEVPKSPDSSYNNVYPGNEDEARDPPMVPSHLQHTLLNYPANRDTAGTVPLPQNVILNHLYIENRESPRSVVALGFTHRFHSKYVTVVLYKPVQRRGNTSI* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1478 117 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-3 1 115 IPR030067 GO:0009744|GO:0043562
Gso11g1478 117 MobiDBLite consensus disorder prediction 1 48 - -
Gso11g1478 117 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 115 IPR043554 -
Gso11g1478 117 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 38 108 IPR006828 GO:0005515
Gso11g1478 117 Gene3D - 13 109 - -
Gso11g1478 117 SUPERFAMILY AMPKBI-like 13 109 IPR037256 -
Gso11g1478 117 SMART AMPKBI_2 20 109 IPR006828 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1478 Gso-Chr11 17151124 17154210 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1478 - - gmx:100785077 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1478 11 17151124 17154210 Gso11g1478 11 17151124 17154210 ECH
Gso12g0644 12 6176297 6179481 Gso11g1478 11 17151124 17154210 GST