Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1449 ATGGCGCTCCCTCACTCCATCTCTGCCTTAGCCACCACACTCACACTCTCCTCCCCAATAACCAAACCCCATAAAGTTAACCCCTTTCCCTTTTCCTCGAACCGAAATTCACAATTTTTAACGAAACAAACGCGACCCAGAAGCAGAAGAAACCTCTCCCTAACCCCTGCACGCGTTGCGGCGCCACCCTCAACGGTTGAAGCCGATCGATTATACCCAGAGGCCGAAAATAACGAAACTGAGGAAGAGTTTAGCGACGAGAGCTCTTCCTCTAAATTCACTTGGAGGGATCACTGGTACCCTGTCTCGTTAATTGAAGATCTGAACCCTCTCTTGCCCACACCGTTTCAGCTTCTGGGTCGTGAAATCGTGCTCTGGTACGACAAGTCCATTTCCCAATGGGTTGCTTTTGATGACAAATGCCCCCATCGTCTTGCCCCTTTATCTGAAGGGAGGATAGATGAAGATGGGAAGTTGCAGTGTTCTTATCATGGGTGGTCTTTTGATGGGTGTGGATCTTGTGTTAAGATTCCTCAGGCTTCATCTGAAGGCCCCGAAGCACGTGCTATTGGATCTCCTAAAGCATGTGCCACTAGGTTCCCTACCTTGGTGTCCCAGGGTTTGCTCTTTGTATGGCCTGATGAGAATGGTTGGGAGAAAGCAAAGGCCTCCAAGCCTCCAATGTTGCCTGATGACATTGACAAACCGGAGTTTGCCACGGTCAACATTCAGCGTGATCTGTTCTATGGTTACGATACTCTCATGGAGAATGTCTCTGATCCTTCTCACATTGAGTTTGCTCATCACAAGGTCACGGGAAGGAGAGACAGAGCCAAACCTCTGCCATTCAAGATGGATTCTCGTGGTTCATGGGGCTTCTCTGGAGCTAATGAAGGGAACCCACAGATCAGTGCCAAGTTTGTTGCACCATGTTATATGATGAACAAGATTGAGATTGATACCAAACTCCCTGTAGTTGGTGACCAGAAATGGGTAGTATGGATATGTTCCTTCAATGTCCCCATGGCACCTGGTAAGACTCGCTCCATTGTTTGCAGTGCTCGAAACTTCTTCCAGTTCTCAGTGCCAGGGCCTGCCTGGTGGCAAGTCGTTCCTAGATGGTATGAGCATTGGACTTCAAATAAGGTATATGATGGAGACATGATTGTCCTTCAAGGTCAAGAGAAAATCTTCCTTTCAGAAACCAAGGAAGGTGGTGACATTAACAAACAGTACACAAACATCACCTTCACACCAACACAGGCAGATCGCTTTGTCTTGGCATTCCGAAATTGGCTGAGGCGACATGGCAATGGCCAACCAGAATGGTTTGGAAACAGCAGCGACCAGCCATTGCCATCAACTGTGTTATCAAAACGTCAGATGTTGGATAGATTTGAACAGCACACTCTCAAGTGTTCATCATGTAAAGCAGCATATGAGGGATTCCAAACATGGCAGAAAGTCCTAATTGGGGCAACAGTTGTGTTTTGTGCAACATCAGGGATCCCATCAGATTTCCAGTTGCGTGTACTTTTGGCTGGACTCGCAGTTGTCAGCGCAGCCATAGCTTTTGCCCTAAACCAACTCCAAAAGAATTTTGAATTCGTGGATTACGTGCATGCGGAAATCGATTAA 1638 0.4731 MALPHSISALATTLTLSSPITKPHKVNPFPFSSNRNSQFLTKQTRPRSRRNLSLTPARVAAPPSTVEADRLYPEAENNETEEEFSDESSSSKFTWRDHWYPVSLIEDLNPLLPTPFQLLGREIVLWYDKSISQWVAFDDKCPHRLAPLSEGRIDEDGKLQCSYHGWSFDGCGSCVKIPQASSEGPEARAIGSPKACATRFPTLVSQGLLFVWPDENGWEKAKASKPPMLPDDIDKPEFATVNIQRDLFYGYDTLMENVSDPSHIEFAHHKVTGRRDRAKPLPFKMDSRGSWGFSGANEGNPQISAKFVAPCYMMNKIEIDTKLPVVGDQKWVVWICSFNVPMAPGKTRSIVCSARNFFQFSVPGPAWWQVVPRWYEHWTSNKVYDGDMIVLQGQEKIFLSETKEGGDINKQYTNITFTPTQADRFVLAFRNWLRRHGNGQPEWFGNSSDQPLPSTVLSKRQMLDRFEQHTLKCSSCKAAYEGFQTWQKVLIGATVVFCATSGIPSDFQLRVLLAGLAVVSAAIAFALNQLQKNFEFVDYVHAEID* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1449 545 MobiDBLite consensus disorder prediction 26 89 - -
Gso11g1449 545 SUPERFAMILY ISP domain 92 215 IPR036922 GO:0051537
Gso11g1449 545 Pfam Pheophorbide a oxygenase 307 402 IPR013626 GO:0010277
Gso11g1449 545 Pfam Rieske [2Fe-2S] domain 98 181 IPR017941 GO:0051537
Gso11g1449 545 Gene3D - 94 236 IPR036922 GO:0051537
Gso11g1449 545 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 29 545 - -
Gso11g1449 545 SUPERFAMILY Bet v1-like 206 441 - -
Gso11g1449 545 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 99 211 IPR017941 GO:0051537
Gso11g1449 545 PANTHER PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC 29 545 - -
Gso11g1449 545 CDD Rieske_RO_Alpha_PaO 92 221 - -
Gso11g1449 545 MobiDBLite consensus disorder prediction 26 51 - -
Gso11g1449 545 Gene3D - 237 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1449 Gso-Chr11 16823045 16828555 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1449 K13071 - gmx:100812162 1095.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g1449 11 16823045 16828555 Gso11g1449 11 16823045 16828555 ECH