Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso11g1434 ATGGTATCAGAGCAGGTTCTGACCTTGGGACCTCGTCTTCACTTCCGCTGCGACGAGTACCCACCATTTGTGGTTCACGCACCAAGCCCAATAAGTGCTGGGCGTGAAGGGGGTGTATTGGGAAATACCCAAGTCCCACATCGGCTGCCTCAATCCTTGGAGTGCGGCTTATATATCTGTTGGGCAACTTCAGTTAATGCCAATTGCATTTCAACATTTCAAGTGAGTTTGAGTACTGAAAATGGTTTCAATTTGGAGGTTGAAGAAGTTCTGCTTGGTGGAGCCGGGTACATGTGCACCACTTGGTGGCTTCTCTCTTTGGTGTATGGGTGCTTGCCTGCCACGTTGTTTGGCTTTGAGGCACCAGAGTCACCTGGGGTAAGGCTAAGCCGTGAGGGAGTCACTGCACTTCACCCAGTTGTTCTTGTACCGGGCATTGTGATTGGTGGGTTGGAGCTTTGGGAAGGGAGGTCTTGTGCTGAAGGACTTTTCAGAAAACGGTTGTGGGGTGATAGTTTTGTTCAAATCCTCAAAAGACCTTTGTGCTGGTTAGAGCATCTCTCCTTGCATGATGAGACTGGGCTGGACCCTCCAGGCATTAGAGTCAGGGCAGTGCCAGGGCTTGTTGCTGCTGATAATTTTGCTTCTGGTTATCTTCTTTGGGCAGATTTGATTGAAAATTTGGCAAGAATTGGTTATGAAGGGAGGAATTTGTTCATGTCTGCCTATGACTGGAGACTGTCTTTCCAGAATACTGAGATTCGAGACCAAGCTCTTAGTAGATTGAAGAGTCATATTGAGCTTATGTTTGTAACAAATGGCTATAAGAAAGTGGTAGTGGTACCACAATCTATGGGGGCTATTTATTTTCTCCATTTCCTAAAATGGGTTGAGACACCTCCTCCCATGGGAGGAGGCGGTGGTGGTCCAGGTTGGTGTGACAAGTACATCAAAGCAATCATGAATATTAGCCCTGCATTTCTTGGTGATCCTAGGGCAGTTAGCAATATATTTTCAACCGAAGGCAGTGTTACATTTGTCAGAGCTTTGGCTTCTGGCATTTTAAATTTTGATTACCTTGGTCGTCAAACTCTTGAGCGAGTTATGCGGGTGTGTAGAACGTGGGATTCAATCATCTCATTGATGCCAAAAGGTGGTGAAACCATCTGGGGTGGCTTGGATTGGTGTCTTGAACAATGGAATACCTATGATCAGGTAAAGAAGGAATATGTGAAGCACTTTGCAAGCTCACAGTTACCTGATTCACTTCTCATTACCCTTCATTCAGAGATACCATAA 1299 0.4588 MVSEQVLTLGPRLHFRCDEYPPFVVHAPSPISAGREGGVLGNTQVPHRLPQSLECGLYICWATSVNANCISTFQVSLSTENGFNLEVEEVLLGGAGYMCTTWWLLSLVYGCLPATLFGFEAPESPGVRLSREGVTALHPVVLVPGIVIGGLELWEGRSCAEGLFRKRLWGDSFVQILKRPLCWLEHLSLHDETGLDPPGIRVRAVPGLVAADNFASGYLLWADLIENLARIGYEGRNLFMSAYDWRLSFQNTEIRDQALSRLKSHIELMFVTNGYKKVVVVPQSMGAIYFLHFLKWVETPPPMGGGGGGPGWCDKYIKAIMNISPAFLGDPRAVSNIFSTEGSVTFVRALASGILNFDYLGRQTLERVMRVCRTWDSIISLMPKGGETIWGGLDWCLEQWNTYDQVKKEYVKHFASSQLPDSLLITLHSEIP* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso11g1434 432 Pfam Lecithin:cholesterol acyltransferase 164 404 IPR003386 GO:0006629|GO:0008374
Gso11g1434 432 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 96 411 - -
Gso11g1434 432 Gene3D alpha/beta hydrolase 191 370 IPR029058 -
Gso11g1434 432 SUPERFAMILY alpha/beta-Hydrolases 205 340 IPR029058 -
Gso11g1434 432 PANTHER PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 2-RELATED 96 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso11g1434 Gso-Chr11 16586816 16590425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso11g1434 96 399 Acyl Lipid Metabolism Gene Families AT3G44830 70.492 4.79e-146 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso11g1434 K00679 - gmx:100797438 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso12g0683 12 6729251 6734852 Gso11g1434 11 16586816 16590425 GST